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MT920315.1__QOI66541.1__X__00165

Bact-Vir

MT920315.1__QOI66541.1__X__00165

Identity

Accession:
MT920315 ↗
Kingdom:
phage

Quality

89.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Risoevirus› Erwinia_phage_FBB1

TaxID: 2776772

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-57
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 74.0 6.42e-01 94.6% 82.7%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 72.0 6.32e-01 94.6% 86.3%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.80e-01 94.6% 98.5%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 57.0 5.36e-01 85.7% 82.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.67e-01 87.5% 96.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 55.0 5.25e-01 83.9% 95.4%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.08e-01 85.7% 95.8%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 61.0 3.85e-01 100.0% 52.2%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 54.0 5.05e-01 85.7% 88.6%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.69 56.0 4.13e-01 89.3% 59.3%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.69 60.0 4.41e-01 98.2% 50.0%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 58.0 5.13e-01 100.0% 91.9%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 4.77e-01 82.1% 77.8%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 4.63e-01 78.6% 89.7%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.67 60.0 4.20e-01 100.0% 57.3%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.49e-01 94.6% 98.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 5.43e-01 89.3% 100.0%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.24e-01 94.6% 71.5%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.65 55.0 4.25e-01 100.0% 40.9%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 57.0 4.45e-01 100.0% 53.7%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.25e-01 85.7% 63.5%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.64 56.0 4.33e-01 100.0% 51.2%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 4.37e-01 82.1% 90.7%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.63 52.0 4.07e-01 100.0% 40.9%
1r4kA01 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.62 52.0 4.08e-01 98.2% 93.2%
2jwpA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.62 50.0 3.64e-01 94.6% 96.0%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 3.85e-01 91.1% 49.3%
1nh2C00 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.62 34.0 3.61e-01 96.4% 58.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.78e-01 96.4% 96.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.60e-01 96.4% 97.1%
1zyoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 45.0 4.00e-01 83.9% 98.8%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.60e-01 83.9% 94.6%
2xfmA00 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.59 50.0 3.98e-01 98.2% 100.0%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 43.0 2.82e-01 83.9% 38.8%
2c6uA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.57 46.0 3.69e-01 94.6% 80.3%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.55 37.0 3.51e-01 71.4% 81.1%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.55 43.0 3.85e-01 89.3% 92.7%
1ltoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 41.0 3.38e-01 83.9% 87.2%
4b43A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 45.0 3.58e-01 94.6% 71.3%
4kktA01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.52 43.0 3.75e-01 100.0% 71.9%
2cn3A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.55e-01 87.5% 24.6%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.52 42.0 3.67e-01 96.4% 94.7%
2yvlA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.51 40.0 4.04e-01 89.3% 98.3%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4078549 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.85 75.0 5.33e-01 94.6% 44.7%
4023922 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.84 74.0 5.39e-01 94.6% 47.9%
3595917 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 74.0 5.22e-01 94.6% 43.9%
4282594 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.83 73.0 5.38e-01 94.6% 49.6%
2664854 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.83 73.0 5.85e-01 94.6% 67.6%
4275696 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.82 73.0 5.37e-01 94.6% 54.6%
3407615 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.75 57.0 4.80e-01 80.4% 65.6%
3498549 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.73 64.0 6.00e-01 94.6% 92.6%
3400526 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.73 55.0 4.59e-01 80.4% 71.3%
3243909 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.69 59.0 4.29e-01 100.0% 75.8%
3166323 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.94e-01 83.9% 74.3%
4409482 3158.1.1.2 ↗ beta barrels › uncharacterized protein RUMGNA_01417 › uncharacterized protein RUMGNA_01417 › uncharacterized protein RUMGNA_01417 › DUF2777 0.68 57.0 5.28e-01 98.2% 96.0%
4484893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 50.0 4.83e-01 80.4% 84.6%
3453083 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 4.80e-01 98.2% 98.0%
5022745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 4.63e-01 94.6% 93.3%
3730229 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.67 56.0 5.04e-01 91.1% 82.7%
4277582 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.67 59.0 4.46e-01 100.0% 48.9%
3223271 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.94e-01 94.6% 61.2%
3743525 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 54.0 4.44e-01 91.1% 68.6%
3581968 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 4.31e-01 100.0% 57.6%
3234037 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.66 57.0 4.50e-01 100.0% 97.5%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.66 57.0 4.25e-01 98.2% 48.3%
3211114 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 4.22e-01 100.0% 99.3%
3396740 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 4.80e-01 100.0% 100.0%
3635008 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.65 54.0 3.97e-01 92.9% 60.0%
3618606 304.112.1.10 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › Med13_N 0.64 55.0 3.47e-01 100.0% 23.8%
3993273 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.63 53.0 4.16e-01 92.9% 55.0%
4252291 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.63 54.0 3.86e-01 100.0% 76.1%
3396446 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.62 55.0 4.25e-01 100.0% 95.2%
1807495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.08e-01 92.9% 100.0%
3212402 10.32.1.37 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.61 49.0 3.59e-01 94.6% 93.7%
3246598 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.60 51.0 4.02e-01 100.0% 99.2%
3648535 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.59 48.0 3.64e-01 98.2% 76.2%
3797639 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.04e-01 100.0% 98.3%
3623192 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.59 48.0 3.89e-01 96.4% 100.0%
3460634 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.59 51.0 3.89e-01 100.0% 85.0%
3777607 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.58 44.0 3.13e-01 82.1% 69.7%
3929651 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.58 49.0 4.00e-01 100.0% 100.0%
3279860 4252.1.1.14 ↗ beta barrels › AttH-like › AttH-like › AttH-like › PF30556 0.58 43.0 2.98e-01 82.1% 70.2%
3936802 10.1.1.90 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29322 0.56 48.0 3.60e-01 100.0% 70.7%
3231485 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 46.0 3.48e-01 100.0% 71.2%
3848155 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.54 39.0 2.75e-01 82.1% 70.0%
3936285 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.90e-01 100.0% 94.2%
3524259 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.52 37.0 2.76e-01 82.1% 71.4%
3202276 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 39.0 2.76e-01 83.9% 69.5%
5040546 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 38.0 2.76e-01 80.4% 32.0%
3175498 5.1.4.332 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 0.50 39.0 2.44e-01 87.5% 23.9%