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MT939492.1__QNR51716.1__Xoosp14_25__00025
Bact-VirMT939492.1__QNR51716.1__Xoosp14_25__00025
Identity
- Accession:
- MT939492 ↗
- Kingdom:
- phage
Quality
79.1
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-98
Domain cluster:
rep: NC_027397.1__YP_009153062.1__ACQ41_gp36__00036__D57-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25311.2 best | WDGH | 32.7 | 1.00e-07 | 89.5% | 85.6% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 39.0 | 3.74e-01 | 72.6% | 74.1% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 34.0 | 3.93e-01 | 80.0% | 91.0% |
| 2opjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 32.0 | 3.40e-01 | 74.7% | 68.6% |
| 6fmeA03 | 2.20.220.10 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases | 0.51 | 29.0 | 3.46e-01 | 73.7% | 83.9% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 36.0 | 3.59e-01 | 89.5% | 71.1% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 34.0 | 3.07e-01 | 75.8% | 48.5% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.61e-01 | 76.8% | 71.3% |
| 2kbnA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 35.0 | 3.35e-01 | 76.8% | 62.4% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 33.0 | 3.55e-01 | 75.8% | 78.0% |
| 3lssA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 43.0 | 3.07e-01 | 100.0% | 71.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1822301 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.61 | 43.0 | 2.69e-01 | 72.6% | 22.0% |
| 3891726 | 2003.1.2.103 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase, NAD_binding_8 | 0.59 | 41.0 | 2.64e-01 | 72.6% | 62.0% |
| 1678533 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.59 | 37.0 | 4.15e-01 | 77.9% | 84.3% |
| 3263883 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.59 | 41.0 | 2.66e-01 | 72.6% | 23.1% |
| 3390821 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 38.0 | 4.17e-01 | 82.1% | 80.0% |
| 3463266 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.56 | 33.0 | 4.08e-01 | 75.8% | 91.7% |
| 167520 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 39.0 | 3.51e-01 | 72.6% | 62.5% |
| 3258685 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 36.0 | 3.41e-01 | 80.0% | 54.8% |
| 3639842 | 5.1.4.321 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 | 0.55 | 39.0 | 2.48e-01 | 73.7% | 29.5% |
| 4044230 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 38.0 | 3.06e-01 | 72.6% | 52.8% |
| 4481477 | 7579.1.1.27 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 | 0.54 | 40.0 | 2.79e-01 | 76.8% | 85.4% |
| 4979493 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 37.0 | 3.48e-01 | 78.9% | 56.7% |
| 4971091 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.54 | 37.0 | 3.36e-01 | 71.6% | 63.0% |
| 3327232 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.54 | 37.0 | 2.63e-01 | 71.6% | 77.7% |
| 4211951 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.53 | 35.0 | 3.81e-01 | 74.7% | 80.0% |
| 3730099 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 39.0 | 4.32e-01 | 88.4% | 100.0% |
| 5069515 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 35.0 | 3.35e-01 | 76.8% | 56.5% |
| 5016920 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.53 | 37.0 | 4.05e-01 | 80.0% | 89.7% |
| 5020392 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 37.0 | 3.33e-01 | 78.9% | 53.1% |
| 3390564 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 35.0 | 3.41e-01 | 82.1% | 61.0% |
| 3864474 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 39.0 | 3.29e-01 | 80.0% | 90.9% |
| 4144799 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.52 | 34.0 | 3.78e-01 | 74.7% | 90.0% |
| 5022600 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 34.0 | 3.55e-01 | 76.8% | 72.2% |
| 3911301 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 34.0 | 3.63e-01 | 85.3% | 77.6% |
| 3503377 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 39.0 | 3.79e-01 | 89.5% | 73.3% |
| 3505248 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 39.0 | 3.84e-01 | 89.5% | 77.0% |
| 146717 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 37.0 | 3.70e-01 | 97.9% | 75.5% |
| 4987937 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.51 | 38.0 | 3.49e-01 | 80.0% | 60.8% |
| 3508799 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.50 | 37.0 | 3.95e-01 | 87.4% | 91.3% |
| 3704463 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.50 | 44.0 | 3.43e-01 | 100.0% | 89.5% |
D2
high
residues 105-147