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MT939492.1__QNR51759.1__Xoosp14_68__00068
Bact-VirMT939492.1__QNR51759.1__Xoosp14_68__00068
Identity
- Accession:
- MT939492 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-88
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4wB01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.66 | 45.0 | 3.37e-01 | 97.5% | 29.4% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.63 | 42.0 | 4.73e-01 | 96.3% | 98.2% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.63 | 39.0 | 4.03e-01 | 95.1% | 66.2% |
| 2n5fA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 55.0 | 4.81e-01 | 100.0% | 64.2% |
| 3bqoA00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.62 | 49.0 | 3.63e-01 | 98.8% | 33.7% |
| 7wf8B01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.61 | 44.0 | 3.83e-01 | 97.5% | 50.4% |
| 4g10A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 54.0 | 4.57e-01 | 100.0% | 58.8% |
| 3itwB01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 37.0 | 4.02e-01 | 79.0% | 77.3% |
| 2d9jA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.59 | 43.0 | 4.43e-01 | 97.5% | 78.5% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 52.0 | 4.49e-01 | 100.0% | 62.3% |
| 5xfaA04 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.59 | 43.0 | 4.30e-01 | 97.5% | 74.1% |
| 2acxA01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.59 | 44.0 | 3.27e-01 | 97.5% | 31.2% |
| 3nynA03 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.59 | 43.0 | 4.39e-01 | 97.5% | 79.0% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.58 | 43.0 | 4.19e-01 | 95.1% | 71.6% |
| 2gz6A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.58 | 51.0 | 3.33e-01 | 100.0% | 24.7% |
| 3vldA01 | 1.25.10.50 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.58 | 49.0 | 3.31e-01 | 100.0% | 25.0% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 45.0 | 4.11e-01 | 85.2% | 74.3% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.57 | 50.0 | 4.71e-01 | 96.3% | 85.6% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.57 | 36.0 | 3.73e-01 | 77.8% | 66.7% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.57 | 39.0 | 4.31e-01 | 93.8% | 93.7% |
| 2hpsA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 46.0 | 3.68e-01 | 95.1% | 78.8% |
| 3k1dA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 43.0 | 2.77e-01 | 82.7% | 38.9% |
| 7z7vF03 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.56 | 41.0 | 4.07e-01 | 96.3% | 72.7% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.56 | 48.0 | 4.46e-01 | 95.1% | 77.5% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 49.0 | 4.49e-01 | 100.0% | 82.4% |
| 5mdtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 50.0 | 4.05e-01 | 100.0% | 63.8% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.55 | 42.0 | 3.82e-01 | 93.8% | 60.0% |
| 2gnoA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.54 | 45.0 | 4.30e-01 | 95.1% | 98.0% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 47.0 | 4.41e-01 | 96.3% | 90.8% |
| 6j3eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 47.0 | 3.89e-01 | 100.0% | 75.0% |
| 4o7oA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.53 | 47.0 | 3.39e-01 | 100.0% | 72.4% |
| 4akgA04 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.53 | 46.0 | 3.77e-01 | 98.8% | 90.4% |
| 3wiwA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 47.0 | 3.04e-01 | 100.0% | 22.1% |
| 3gt5A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 44.0 | 2.90e-01 | 98.8% | 22.8% |
| 5a0tB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 41.0 | 2.85e-01 | 87.7% | 54.3% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.52 | 33.0 | 3.75e-01 | 91.4% | 93.0% |
| 3k2yA00 | 3.30.70.2330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.33e-01 | 72.8% | 100.0% |
| 3hhwK01 | 1.10.3570.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain | 0.51 | 44.0 | 3.41e-01 | 96.3% | 93.4% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.50 | 44.0 | 3.58e-01 | 100.0% | 86.1% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039359 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.73 | 51.0 | 3.96e-01 | 100.0% | 34.7% |
| 3642597 | 109.4.1.498 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 | 0.71 | 56.0 | 3.38e-01 | 82.7% | 25.0% |
| 3750890 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.68 | 52.0 | 3.72e-01 | 81.5% | 63.5% |
| 4589398 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.67 | 38.0 | 2.92e-01 | 91.4% | 25.0% |
| 3575710 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 50.0 | 3.07e-01 | 81.5% | 34.9% |
| 3627404 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.65 | 47.0 | 3.52e-01 | 100.0% | 30.7% |
| 5047565 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 46.0 | 4.20e-01 | 100.0% | 56.4% |
| 3935262 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.63 | 43.0 | 3.70e-01 | 100.0% | 43.0% |
| 4882576 | 221.1.2.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4,S4 | 0.62 | 36.0 | 2.87e-01 | 91.4% | 27.1% |
| 4020488 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.62 | 47.0 | 3.79e-01 | 100.0% | 40.0% |
| 3834520 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 50.0 | 3.74e-01 | 100.0% | 34.4% |
| 4027756 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.61 | 47.0 | 3.22e-01 | 85.2% | 76.3% |
| 3490529 | 109.4.1.2013 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31013 | 0.60 | 53.0 | 4.17e-01 | 96.3% | 70.1% |
| 3263826 | 109.4.1.1234 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DNAAF5 | 0.60 | 54.0 | 3.44e-01 | 100.0% | 21.3% |
| 3592539 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 52.0 | 4.64e-01 | 100.0% | 68.7% |
| 3783862 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.59 | 53.0 | 3.69e-01 | 100.0% | 72.7% |
| 3583290 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 50.0 | 4.05e-01 | 100.0% | 48.8% |
| 4564223 | 161.1.1.1 ↗ | alpha complex topology › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › SecA_SW | 0.58 | 40.0 | 3.06e-01 | 74.1% | 36.7% |
| 3865366 | 109.4.1.85 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nop52 | 0.58 | 52.0 | 3.48e-01 | 100.0% | 26.9% |
| 5009902 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.58 | 45.0 | 3.80e-01 | 100.0% | 49.3% |
| 4949854 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.58 | 47.0 | 4.21e-01 | 96.3% | 63.7% |
| 4313724 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.58 | 42.0 | 3.07e-01 | 79.0% | 27.7% |
| 3567486 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 52.0 | 3.35e-01 | 100.0% | 22.7% |
| 3713723 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 51.0 | 3.20e-01 | 100.0% | 43.8% |
| 3934886 | 109.4.1.1329 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234 | 0.57 | 48.0 | 2.75e-01 | 92.6% | 48.0% |
| 3724163 | 109.1.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_7 | 0.57 | 49.0 | 4.19e-01 | 100.0% | 81.4% |
| 3923534 | 109.4.1.391 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UNC80_C | 0.56 | 51.0 | 2.93e-01 | 100.0% | 12.3% |
| 3519366 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.56 | 46.0 | 3.86e-01 | 100.0% | 52.1% |
| 3273914 | 109.4.1.176 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1,Cnd1_N | 0.56 | 50.0 | 2.77e-01 | 100.0% | 7.3% |
| 3593694 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.56 | 34.0 | 3.70e-01 | 90.1% | 75.4% |
| 371700 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.55 | 46.0 | 3.90e-01 | 93.8% | 78.9% |
| 3559443 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 3.70e-01 | 100.0% | 47.5% |
| 3304651 | 109.4.1.1470 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOR1L1_C | 0.55 | 46.0 | 3.64e-01 | 100.0% | 44.0% |
| 351198 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.55 | 45.0 | 3.82e-01 | 93.8% | 79.0% |
| 4003697 | 109.25.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A | 0.54 | 47.0 | 4.45e-01 | 100.0% | 82.0% |
| 3997012 | 604.30.1.1 ↗ | alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 | 0.54 | 37.0 | 3.57e-01 | 97.5% | 61.1% |
| 3411154 | 109.4.1.139 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hyccin | 0.54 | 47.0 | 3.23e-01 | 100.0% | 64.3% |
| 4011398 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.54 | 40.0 | 3.95e-01 | 95.1% | 76.5% |
| 3675734 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.54 | 45.0 | 4.23e-01 | 100.0% | 76.0% |
| 4616843 | 192.4.1.2 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › MRP-L47 | 0.53 | 47.0 | 3.33e-01 | 100.0% | 38.0% |
| 4667970 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.52 | 39.0 | 3.79e-01 | 93.8% | 72.2% |
| 3373603 | 109.4.1.1470 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOR1L1_C | 0.52 | 39.0 | 3.35e-01 | 98.8% | 47.9% |
| 3939027 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 44.0 | 2.88e-01 | 100.0% | 48.9% |
| 3854356 | 109.4.1.139 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hyccin | 0.50 | 43.0 | 3.03e-01 | 100.0% | 63.4% |
| 4249657 | 604.4.1.6 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › Sey1_3HB | 0.50 | 38.0 | 2.98e-01 | 82.7% | 54.6% |