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MT939492.1__QNR51760.1__Xoosp14_69__00069

Bact-Vir

MT939492.1__QNR51760.1__Xoosp14_69__00069

Identity

Accession:
MT939492 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_Xoo-sp14

TaxID: 2769337

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-151
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.93 69.0 7.82e-01 95.6% 97.2%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.74 56.0 6.01e-01 97.1% 90.6%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 30.0 4.31e-01 80.3% 100.0%
1dc1A01 3.40.91.10 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.64 36.0 3.05e-01 92.0% 34.2%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.64 34.0 3.98e-01 82.5% 72.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 33.0 4.34e-01 83.9% 100.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 31.0 4.00e-01 75.9% 89.3%
3hluA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 31.0 3.98e-01 72.3% 100.0%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.53 32.0 3.83e-01 94.2% 90.1%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 34.0 3.84e-01 77.4% 84.6%
6h8oA00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.50 29.0 3.36e-01 79.6% 78.9%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
605 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.93 69.0 7.82e-01 95.6% 97.2%
165392 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.75 56.0 5.96e-01 94.9% 87.5%
4547801 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 37.0 4.43e-01 83.9% 73.3%
4141828 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 37.0 4.82e-01 83.2% 91.9%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 37.0 4.79e-01 83.2% 91.9%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 38.0 4.51e-01 82.5% 81.1%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 38.0 4.47e-01 83.9% 80.0%
3598125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 30.0 3.95e-01 78.1% 82.7%
4340770 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.56 36.0 4.15e-01 83.9% 93.7%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 30.0 3.09e-01 88.3% 52.6%
4964819 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.54 38.0 4.16e-01 84.7% 90.0%
4973793 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.52 29.0 3.51e-01 72.3% 83.3%
4937872 239.5.1.1 ↗ beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae 0.50 26.0 3.21e-01 86.9% 80.0%