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MT939492.1__QNR51841.1__Xoosp14_150__00150

Bact-Vir

MT939492.1__QNR51841.1__Xoosp14_150__00150

Identity

Accession:
MT939492 ↗
Kingdom:
phage

Quality

73.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_Xoo-sp14

TaxID: 2769337

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-129
PDB
Domain cluster: rep: ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00209__D12-135
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rq1A00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.64 36.0 3.88e-01 100.0% 63.3%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 34.0 4.29e-01 88.0% 91.5%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 38.0 4.50e-01 84.8% 96.2%
1rfzA00 1.10.3760.10 Mainly Alpha › Orthogonal Bundle › YutG-like › PgpA-like 0.60 45.0 4.14e-01 78.4% 68.9%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.59 39.0 4.33e-01 71.2% 84.8%
5t3wA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 37.0 3.60e-01 83.2% 56.9%
8gccA03 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.57 32.0 3.51e-01 90.4% 64.4%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 31.0 3.77e-01 90.4% 83.5%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 31.0 3.98e-01 78.4% 98.5%
4mcwA02 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 40.0 3.51e-01 75.2% 90.2%
5b57B00 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.54 42.0 3.14e-01 84.0% 84.5%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.55e-01 88.8% 100.0%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.53 35.0 3.58e-01 80.8% 68.1%
3lvyE01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.53 43.0 3.89e-01 89.6% 64.8%
4hfkB00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 33.0 3.71e-01 75.2% 80.6%
1to9A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.53 38.0 3.24e-01 76.8% 80.9%
5tgtA02 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 45.0 4.57e-01 98.4% 96.7%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 3.67e-01 78.4% 72.5%
3rylA01 1.20.120.1210 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 36.0 3.59e-01 100.0% 67.9%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 28.0 3.40e-01 86.4% 86.7%
1hw1A02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.50 38.0 3.58e-01 79.2% 89.4%
1jt6A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 37.0 3.67e-01 100.0% 70.8%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3711112 4198.1.1.0 ↗ alpha arrays › TerB-like › TerB-like › TerB-like 0.71 41.0 3.89e-01 100.0% 49.0%
3178452 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 36.0 4.71e-01 76.0% 98.5%
3392016 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.61 44.0 3.45e-01 74.4% 100.0%
3926828 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 4.23e-01 76.0% 80.7%
3797519 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 2.96e-01 86.4% 47.9%
3626320 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.54 41.0 4.33e-01 92.8% 91.8%
3258043 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.53 42.0 4.42e-01 100.0% 99.1%
4531119 1079.1.1.1 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD 0.52 42.0 3.83e-01 86.4% 83.0%
3886268 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.52 41.0 4.37e-01 99.2% 99.1%
3798329 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.51 40.0 4.26e-01 99.2% 97.3%
5042310 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.51 39.0 3.88e-01 83.2% 79.3%
3833019 101.1.1.138 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.50 35.0 3.77e-01 84.0% 84.8%