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MT944117.1__QPI12787.1__X__00044

Bact-Vir

MT944117.1__QPI12787.1__X__00044

Identity

Accession:
MT944117 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-46
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wnsA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.79 45.0 2.85e-01 84.8% 13.2%
7veeA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.70 43.0 2.57e-01 100.0% 9.0%
3r7wC02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.70 41.0 3.11e-01 97.8% 23.4%
2oarB00 1.10.1200.120 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 0.69 41.0 2.90e-01 76.1% 21.6%
2hg4D03 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.68 43.0 2.60e-01 100.0% 9.9%
3pieA02 3.30.1370.250 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.68 37.0 2.89e-01 100.0% 24.0%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 3.90e-01 100.0% 54.7%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 4.04e-01 100.0% 70.5%
2yziB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.61 48.0 3.62e-01 97.8% 87.4%
3ddjA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.60 49.0 3.62e-01 100.0% 88.8%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 3.64e-01 100.0% 53.3%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 3.88e-01 100.0% 72.6%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 3.81e-01 100.0% 68.8%
8gpsA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.59 44.0 3.50e-01 84.8% 86.9%
2jisA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.59 46.0 2.96e-01 89.1% 87.0%
2yzqA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.59 48.0 3.91e-01 100.0% 97.0%
2uv4A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.58 47.0 3.38e-01 93.5% 88.1%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.36e-01 100.0% 45.8%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 3.73e-01 100.0% 75.2%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.81e-01 100.0% 74.8%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.43e-01 97.8% 58.1%
1e3mA01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.57 42.0 3.32e-01 91.3% 73.2%
4uy8X00 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.57 36.0 3.07e-01 97.8% 37.7%
2yzkA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 45.0 3.09e-01 91.3% 31.8%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.56 42.0 3.84e-01 89.1% 70.4%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.36e-01 100.0% 46.6%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.85e-01 100.0% 83.3%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.55e-01 97.8% 80.2%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.83e-01 100.0% 92.1%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.55 43.0 3.66e-01 89.1% 53.5%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 48.0 3.57e-01 100.0% 75.8%
2o16B00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.55 46.0 3.42e-01 100.0% 93.3%
3c19A02 3.10.20.300 Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain 0.55 41.0 3.57e-01 87.0% 89.7%
4cooA03 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.55 44.0 3.32e-01 100.0% 88.3%
1pvmA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 41.0 2.91e-01 91.3% 67.4%
2nycA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 41.0 3.24e-01 97.8% 90.0%
2fgcA03 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.54 37.0 3.27e-01 80.4% 44.7%
2ctkA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 46.0 3.62e-01 100.0% 61.5%
3fhmA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 42.0 3.24e-01 100.0% 89.7%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 41.0 3.24e-01 89.1% 64.9%
3ddjA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 43.0 3.26e-01 100.0% 93.4%
3ocoA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 41.0 3.09e-01 93.5% 86.8%
2yzqA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 43.0 3.33e-01 100.0% 92.0%
2rihA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 44.0 3.36e-01 100.0% 95.4%
3kpbA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 40.0 3.20e-01 93.5% 95.0%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.31e-01 84.8% 55.3%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.53 42.0 3.09e-01 91.3% 37.6%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.53 46.0 4.03e-01 97.8% 76.5%
3f42A00 3.30.1310.10 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain 0.52 46.0 3.65e-01 100.0% 77.4%
5iipA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.52 41.0 3.30e-01 100.0% 97.4%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 40.0 3.43e-01 100.0% 87.4%
1zfjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 46.0 2.64e-01 100.0% 18.7%
2ouxA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 37.0 2.79e-01 80.4% 99.2%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 38.0 3.29e-01 95.7% 91.3%
2mzsA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 37.0 3.04e-01 84.8% 44.4%
3cjxA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 36.0 2.70e-01 84.8% 70.7%
3ocmB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.50 38.0 2.94e-01 100.0% 78.1%
3i8nB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.50 40.0 3.10e-01 100.0% 92.9%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4002647 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.79 44.0 3.08e-01 84.8% 19.3%
5042886 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.78 44.0 2.83e-01 84.8% 13.7%
4153905 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 39.0 3.04e-01 93.5% 25.5%
4939498 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.70 39.0 3.49e-01 91.3% 38.5%
4025415 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.69 39.0 3.38e-01 97.8% 34.3%
4108761 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 41.0 2.89e-01 100.0% 18.7%
5078260 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.66 43.0 2.64e-01 100.0% 11.9%
3604748 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 56.0 3.66e-01 100.0% 37.2%
4984469 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.65 51.0 3.39e-01 91.3% 28.6%
4125586 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.63 44.0 3.00e-01 76.1% 28.9%
3373537 109.4.1.1297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.63 46.0 2.62e-01 82.6% 35.9%
3632795 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.62 47.0 3.64e-01 84.8% 43.6%
4014246 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 2.89e-01 84.8% 16.3%
3442291 2.9.1.1 beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.60 52.0 3.01e-01 100.0% 29.1%
5077851 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 50.0 3.59e-01 100.0% 54.0%
5010819 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 2.88e-01 73.9% 71.3%
3934420 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.60 48.0 3.16e-01 93.5% 58.6%
4940345 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 48.0 3.60e-01 100.0% 57.0%
3267265 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.58 47.0 3.53e-01 100.0% 91.9%
4961086 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.58 47.0 3.36e-01 100.0% 95.7%
5043582 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.58 42.0 2.63e-01 78.3% 87.2%
3342026 2004.1.1.872 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › WH_DRP 0.58 41.0 3.03e-01 76.1% 33.6%
3171307 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.58 51.0 3.79e-01 100.0% 44.3%
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 47.0 3.81e-01 100.0% 74.8%
4975522 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.57 47.0 3.50e-01 100.0% 93.3%
5071269 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 49.0 3.23e-01 100.0% 40.0%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 46.0 3.33e-01 100.0% 48.8%
4980177 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.57 48.0 3.67e-01 100.0% 59.2%
4067342 5069.1.1.15 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.57 47.0 2.82e-01 93.5% 73.6%
5012110 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.57 44.0 3.34e-01 93.5% 86.9%
4946524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 3.71e-01 100.0% 67.3%
4950221 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.56 47.0 3.70e-01 100.0% 70.4%
4976945 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.56 44.0 3.30e-01 100.0% 90.3%
4994427 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.56 45.0 3.41e-01 97.8% 95.4%
4980646 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.56 44.0 3.23e-01 100.0% 89.7%
4987135 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.55 50.0 3.72e-01 100.0% 79.1%
4399888 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.55 41.0 3.93e-01 89.1% 85.0%
5000362 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.55 43.0 3.51e-01 91.3% 57.9%
7276 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 43.0 3.37e-01 100.0% 90.5%
4971747 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.55 49.0 3.66e-01 100.0% 81.8%
5010964 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.55 46.0 3.67e-01 100.0% 74.0%
4989744 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.54 44.0 3.38e-01 100.0% 92.3%
4951211 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.54 44.0 3.41e-01 97.8% 97.5%
4063927 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.54 40.0 2.75e-01 87.0% 26.3%
1169925 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.54 41.0 3.25e-01 100.0% 93.7%
4928248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 3.33e-01 100.0% 56.9%
3417192 327.11.2.27 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin 0.53 36.0 3.57e-01 73.9% 78.0%
144952 304.5.1.10 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CBD_PlyG 0.53 38.0 3.31e-01 84.8% 55.3%
3593859 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.53 41.0 3.23e-01 89.1% 49.5%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 3.64e-01 95.7% 85.7%
5016418 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 42.0 3.10e-01 100.0% 85.4%
5056107 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 43.0 3.25e-01 100.0% 90.0%
4948577 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.52 44.0 3.05e-01 100.0% 59.2%
3307802 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.52 40.0 3.40e-01 91.3% 53.4%
3998536 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.52 40.0 3.04e-01 91.3% 100.0%
4020561 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.52 42.0 3.36e-01 95.7% 48.0%
5077595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.29e-01 95.7% 68.2%
5011597 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 45.0 3.54e-01 100.0% 74.7%
5058268 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.51 40.0 3.15e-01 93.5% 42.6%
4998174 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 39.0 2.85e-01 100.0% 43.3%
3403404 304.7.1.1 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 0.50 39.0 3.34e-01 89.1% 67.5%
5011930 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.50 39.0 3.16e-01 100.0% 97.4%