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MT980836.1__QOI66079.1__X__00043

Bact-Vir

MT980836.1__QOI66079.1__X__00043

Identity

Accession:
MT980836 ↗
Kingdom:
phage

Quality

71.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-57
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.27e-01 87.8% 65.9%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 43.0 2.69e-01 73.5% 19.3%
3ejgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.61 49.0 3.56e-01 98.0% 34.5%
1dekA02 1.10.238.70 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.60 47.0 3.66e-01 93.9% 90.2%
4bjqA00 1.10.150.770 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.60 51.0 4.46e-01 100.0% 70.5%
4hv0C00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.59 50.0 4.17e-01 98.0% 92.1%
6j09A01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.59 42.0 3.82e-01 75.5% 97.0%
4xaaA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.58 46.0 3.06e-01 91.8% 41.6%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.57 47.0 3.43e-01 95.9% 63.3%
4kdyB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 45.0 3.88e-01 89.8% 87.5%
1zarA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 40.0 3.40e-01 75.5% 70.4%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.25e-01 81.6% 53.6%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 44.0 3.50e-01 98.0% 41.0%
2c1iA02 3.90.640.30 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.55 44.0 3.85e-01 91.8% 81.8%
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.01e-01 95.9% 75.0%
2j0nB00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.55 40.0 2.75e-01 77.6% 72.2%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 2.98e-01 83.7% 77.0%
4ciuA04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 45.0 3.78e-01 100.0% 80.6%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.54 39.0 3.47e-01 83.7% 52.4%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.53e-01 98.0% 45.9%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.54 44.0 2.71e-01 98.0% 94.2%
6zxbA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 42.0 3.23e-01 98.0% 63.2%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 43.0 3.33e-01 89.8% 77.0%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 45.0 3.04e-01 100.0% 81.7%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.81e-01 98.0% 70.5%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.53 43.0 3.87e-01 95.9% 64.8%
1z90B01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 44.0 2.69e-01 100.0% 91.0%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 36.0 2.94e-01 71.4% 55.3%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.52 39.0 3.28e-01 100.0% 65.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.87e-01 95.9% 71.4%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.44e-01 83.7% 81.5%
2r8rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 41.0 2.85e-01 100.0% 35.4%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.57e-01 98.0% 54.0%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.95e-01 95.9% 79.3%
2qsrA01 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.51 41.0 3.08e-01 100.0% 34.2%
3g1nA02 3.30.2160.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain 0.51 37.0 3.29e-01 83.7% 92.5%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 40.0 3.53e-01 100.0% 98.9%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.04e-01 95.9% 33.6%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.15e-01 98.0% 42.3%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.65e-01 95.9% 62.3%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 40.0 3.02e-01 100.0% 71.6%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.50 38.0 2.78e-01 100.0% 89.3%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5076430 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.69 52.0 4.79e-01 83.7% 89.2%
5038778 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.68 48.0 3.57e-01 77.6% 34.1%
3930630 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.67 54.0 3.47e-01 93.9% 60.4%
3459843 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.63 40.0 2.31e-01 87.8% 6.3%
3360215 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.62 38.0 2.51e-01 71.4% 15.1%
3810777 109.4.1.2426 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, Eplus_motif, E_motif 0.62 38.0 2.41e-01 81.6% 11.6%
3809045 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.62 39.0 2.40e-01 87.8% 10.0%
3168940 109.4.1.64 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 0.61 43.0 2.67e-01 75.5% 17.7%
3960386 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.60 47.0 4.43e-01 87.8% 90.0%
3350868 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.60 41.0 2.38e-01 89.8% 7.2%
3587571 101.1.2.93 alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.59 48.0 4.32e-01 95.9% 64.3%
5072831 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 43.0 4.08e-01 83.7% 85.7%
3295463 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.58 42.0 2.34e-01 75.5% 6.8%
3668229 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.58 39.0 2.33e-01 87.8% 9.4%
3334414 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.57 41.0 2.43e-01 75.5% 12.8%
3809404 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.57 39.0 2.23e-01 73.5% 7.9%
3453507 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.57 39.0 2.49e-01 71.4% 26.5%
3367818 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.57 41.0 2.30e-01 75.5% 8.4%
3837438 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.57 39.0 2.49e-01 71.4% 19.6%
4457710 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 38.0 2.90e-01 71.4% 39.2%
3311781 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.56 38.0 2.24e-01 71.4% 13.5%
3641281 109.4.1.2665 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_7, PPR_3, E_motif 0.56 40.0 2.28e-01 75.5% 8.2%
3663676 109.4.1.2646 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, E_motif, TPR_24 0.55 41.0 2.23e-01 81.6% 5.6%
5050738 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.27e-01 98.0% 31.7%
3373809 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.55 38.0 2.68e-01 73.5% 29.0%
3306714 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.54 38.0 2.30e-01 75.5% 13.1%
5077319 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 41.0 2.89e-01 91.8% 58.9%
3641285 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.53 39.0 2.25e-01 81.6% 8.3%
4496753 241.1.1.8 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2170 0.53 41.0 3.14e-01 91.8% 58.5%
3511790 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.53 41.0 3.61e-01 91.8% 55.0%
3442448 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.53 40.0 2.27e-01 81.6% 8.1%
3828334 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.53 38.0 2.38e-01 83.7% 12.8%
3465965 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 39.0 2.28e-01 81.6% 10.8%
3436796 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 39.0 2.22e-01 81.6% 8.6%
3453217 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.52 39.0 2.36e-01 81.6% 13.9%
4958611 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.52 42.0 2.93e-01 93.9% 54.6%
3817779 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 39.0 2.38e-01 81.6% 15.2%
3346465 109.4.1.1371 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif 0.52 39.0 2.24e-01 81.6% 9.3%
4968472 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.52 43.0 2.86e-01 98.0% 43.1%
4982703 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 41.0 3.44e-01 91.8% 53.3%
3377363 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 38.0 2.13e-01 81.6% 6.6%
3821634 109.4.1.1335 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.52 38.0 2.55e-01 81.6% 25.4%
3586847 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.51 41.0 3.61e-01 98.0% 57.5%
3805784 109.4.1.3484 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, E_motif 0.51 38.0 2.69e-01 81.6% 32.4%
3340255 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.51 38.0 2.25e-01 81.6% 11.2%
4614032 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.51 41.0 3.53e-01 95.9% 56.2%
4941856 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.51 42.0 3.33e-01 98.0% 44.5%
None 0.51 34.0 2.39e-01 73.5% 39.5%
3377432 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.51 39.0 2.28e-01 87.8% 10.3%
3808578 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.50 37.0 3.28e-01 77.6% 59.5%
3603208 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.50 37.0 3.35e-01 79.6% 85.7%
3419693 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.50 37.0 2.53e-01 81.6% 29.2%
3283775 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.50 42.0 2.91e-01 98.0% 27.2%
3821986 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.50 40.0 2.48e-01 87.8% 20.0%
3301231 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.50 39.0 2.33e-01 87.8% 12.4%
4959935 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.50 42.0 2.89e-01 95.9% 26.5%