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MT980837.1__QOI66132.1__X__00042

Bact-Vir

MT980837.1__QOI66132.1__X__00042

Identity

Accession:
MT980837 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ahaonvirus› Ruminococcus_phage_phiRg507T2_3

TaxID: 2772518

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-71
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d2sA01 1.20.58.1210 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain 0.69 60.0 5.06e-01 97.1% 76.7%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.68 45.0 4.51e-01 77.9% 66.2%
8fnyA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 43.0 3.12e-01 80.9% 29.6%
1aipA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 46.0 3.47e-01 97.1% 45.9%
3kuqA00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.52 42.0 3.08e-01 89.7% 32.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3686422 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.73 58.0 5.03e-01 86.8% 62.9%
4436943 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.68 56.0 5.33e-01 88.2% 86.3%
3973453 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.65 48.0 4.58e-01 77.9% 67.5%
4955292 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 4.21e-01 91.2% 44.6%
3936544 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 51.0 4.00e-01 95.6% 48.7%
D2 high residues 79-219
PDB
Domain cluster: rep: IMGVR_UViG_3300038975_000152-3300038975-Ga0416723_08330_3207_5261__D335-454
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 44.9 1.70e-11 87.9% 39.1%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1atrA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 29.0 3.48e-01 81.6% 77.5%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.52 29.0 3.06e-01 76.6% 57.6%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.52 37.0 3.86e-01 80.1% 80.8%
1bebA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 38.0 3.68e-01 76.6% 69.2%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018480 1104.1.1.0 ↗ a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain 0.83 78.0 7.08e-01 98.6% 90.6%
3948387 1104.1.1.1 ↗ a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.72 61.0 5.96e-01 88.7% 92.0%
4024735 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 34.0 4.85e-01 74.5% 98.6%
4965393 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.63 33.0 4.08e-01 82.3% 80.0%
3868838 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 39.0 3.73e-01 75.9% 66.3%
184719 3514.1.1.1 ↗ a+b two layers › uncharacterized protein PA1076 › uncharacterized protein PA1076 › uncharacterized protein PA1076 › DUF5064 0.52 37.0 3.86e-01 80.1% 80.8%
4960002 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 28.0 3.43e-01 72.3% 83.3%
4030153 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.51 32.0 3.69e-01 74.5% 87.0%
3960090 2484.1.1.216 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF7159 0.51 36.0 3.27e-01 78.7% 53.3%
D3 high residues 226-425
PDB
Domain cluster: rep: OP947158.1__WBK39751.1__X__00033__D1-199
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 90.8 1.70e-25 75.0% 47.2%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 61.0 6.14e-01 98.5% 92.1%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 50.0 5.78e-01 78.5% 100.0%
3n70A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 47.0 5.51e-01 82.5% 97.9%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 52.0 5.81e-01 90.5% 97.5%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 47.0 5.37e-01 83.5% 94.0%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 52.0 4.28e-01 82.0% 49.3%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 53.0 4.99e-01 83.5% 93.6%
5e7pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 54.0 5.75e-01 89.0% 100.0%
3nbxX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 56.0 5.55e-01 93.0% 88.0%
7jgsE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 52.0 5.46e-01 83.5% 98.9%
7jgsD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 50.0 5.14e-01 81.0% 94.2%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 49.0 4.70e-01 80.5% 91.1%
3bh0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 52.0 4.56e-01 87.5% 89.4%
8gjaD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 4.66e-01 88.5% 92.6%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 52.0 5.28e-01 91.0% 100.0%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 4.66e-01 88.0% 86.3%
8gj8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 4.69e-01 89.0% 94.0%
2o0jA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 4.49e-01 86.0% 87.4%
4a1fB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 4.19e-01 86.5% 88.9%
2w0mA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 4.71e-01 86.5% 92.7%
4k2bA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.58 38.0 3.28e-01 79.5% 42.2%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 4.86e-01 88.5% 97.6%
5zspA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 40.0 3.72e-01 79.0% 58.4%
4dzzA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 42.0 4.17e-01 77.0% 89.3%
3huuC02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 34.0 4.06e-01 76.5% 90.2%
3d02A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 38.0 4.25e-01 78.5% 90.2%
3rhfD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 44.0 3.94e-01 83.5% 74.9%
2zq5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 3.31e-01 75.5% 71.5%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 43.0 4.30e-01 83.5% 86.9%
3czqC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 3.84e-01 82.5% 72.5%
2c61A00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 49.0 3.80e-01 97.5% 78.7%
2rgyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 35.0 4.14e-01 76.5% 96.3%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 36.0 4.06e-01 77.0% 88.2%
1sq5C00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 47.0 4.06e-01 92.0% 91.3%
2ozeA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 4.15e-01 93.5% 92.3%
5dteA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 36.0 4.04e-01 78.5% 88.9%
3l6uA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 36.0 4.11e-01 77.0% 95.8%
5l3qB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 41.0 3.94e-01 82.5% 93.2%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 36.0 3.99e-01 79.0% 87.4%
1dbrC00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 34.0 3.33e-01 77.0% 59.1%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 41.0 4.36e-01 83.0% 97.7%
4rsmA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 34.0 3.81e-01 76.5% 88.0%
3gqwB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.51 44.0 3.46e-01 94.0% 86.2%
2fqxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 41.0 4.29e-01 85.5% 97.3%
3ihtA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 34.0 3.76e-01 77.0% 84.0%
4oe6B02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.50 38.0 3.89e-01 77.5% 81.2%
7uyyA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.50 38.0 3.98e-01 78.0% 86.1%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975473 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.91 85.0 7.30e-01 96.0% 70.3%
5018481 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.91 84.0 7.23e-01 95.5% 66.7%
3944606 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.91 84.0 7.26e-01 95.5% 70.2%
1883334 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.88 79.0 7.00e-01 95.5% 68.5%
5058121 2004.1.1.1224 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF31144 0.74 68.0 5.89e-01 100.0% 65.0%
4973289 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 66.0 5.98e-01 98.5% 77.4%
None — 0.71 55.0 5.94e-01 84.0% 93.5%
4134156 2004.1.1.125 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.71 55.0 6.07e-01 83.0% 99.4%
None — 0.71 56.0 5.93e-01 86.0% 92.6%
5022020 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.70 65.0 5.88e-01 98.5% 78.1%
4443044 2004.1.1.1014 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 0.70 65.0 5.54e-01 98.5% 72.3%
4285993 2004.1.1.125 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.70 49.0 5.59e-01 83.0% 94.0%
3291643 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.70 61.0 5.78e-01 90.5% 96.5%
4998715 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 52.0 5.87e-01 86.5% 100.0%
4069782 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 57.0 5.17e-01 90.0% 66.4%
3610966 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 60.0 5.27e-01 92.5% 92.1%
3646142 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.67 56.0 5.59e-01 87.0% 96.1%
None — 0.67 49.0 5.45e-01 85.5% 93.8%
4007069 2004.1.1.624 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_5 0.67 58.0 5.82e-01 93.0% 99.5%
4308308 2004.1.1.771 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_lid_NAV1 0.66 56.0 4.61e-01 88.5% 56.2%
5014143 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.66 51.0 5.00e-01 79.0% 99.0%
5039660 2004.1.1.22 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.66 56.0 4.85e-01 89.0% 89.5%
4218663 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 53.0 5.32e-01 84.5% 87.8%
4940479 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 59.0 5.66e-01 95.5% 98.7%
4033843 2004.1.1.313 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VapE-like_dom 0.65 57.0 5.79e-01 98.5% 96.9%
4941655 2004.1.1.129 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zot 0.64 54.0 5.64e-01 87.5% 100.0%
4027191 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 56.0 5.21e-01 91.5% 84.9%
4048177 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 55.0 5.16e-01 91.5% 80.4%
None — 0.64 55.0 5.27e-01 90.5% 87.6%
3537109 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 55.0 5.12e-01 91.0% 80.8%
3665750 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 57.0 4.72e-01 97.0% 63.9%
4982769 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.63 55.0 4.77e-01 92.0% 72.3%
3589232 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 52.0 4.00e-01 87.5% 60.5%
3277906 2004.1.1.239 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase 0.62 53.0 5.38e-01 90.0% 96.5%
4182861 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.61 50.0 4.91e-01 85.0% 84.7%
5012533 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.60 50.0 4.89e-01 88.5% 92.8%
5072980 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.59 49.0 4.67e-01 88.0% 97.4%
4944736 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 52.0 4.98e-01 94.0% 91.7%
5056293 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.58 48.0 4.66e-01 86.5% 95.6%
5069117 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.58 46.0 4.44e-01 82.5% 95.2%
5078041 2004.1.1.161 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.57 45.0 4.50e-01 81.0% 96.5%
3727916 2004.1.1.211 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.55 42.0 3.92e-01 80.0% 90.8%
3578118 2004.1.1.211 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.54 43.0 4.16e-01 81.5% 91.4%
4020476 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.52 41.0 3.32e-01 81.0% 68.9%
4466437 2004.1.1.211 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.51 41.0 3.84e-01 84.0% 87.2%
3351227 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 38.0 3.18e-01 78.0% 66.6%
D4 high residues 501-609
PDB
Domain cluster: rep: IMGVR_UViG_3300002219_000139-3300002219-SCADCLC_1004105917__D772-872
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18662.8 best HTH_56 69.8 2.70e-19 89.9% 98.2%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 41.0 4.64e-01 93.6% 84.0%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 4.77e-01 89.9% 100.0%
2krhA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.62 42.0 4.62e-01 91.7% 88.2%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 38.0 4.33e-01 89.9% 85.7%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.84e-01 94.5% 55.9%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 36.0 4.18e-01 82.6% 86.7%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 30.0 3.62e-01 84.4% 78.5%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.59e-01 92.7% 84.5%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 4.15e-01 90.8% 84.6%
3mkkA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 40.0 2.77e-01 75.2% 55.9%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 4.43e-01 89.9% 100.0%
2ch0A01 1.10.10.1180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain 0.52 38.0 3.97e-01 89.9% 85.7%
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.51 38.0 3.09e-01 78.9% 79.6%
1u7lA01 3.30.70.1180 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Vacuolar atp synthase subunit c; domain 1 0.51 30.0 3.22e-01 86.2% 65.9%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 34.0 3.74e-01 73.4% 85.2%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3510016 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 71.0 7.14e-01 87.2% 100.0%
3981665 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 73.0 7.28e-01 89.0% 100.0%
5018482 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 72.0 7.52e-01 92.7% 99.0%
3304578 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 44.0 2.76e-01 93.6% 12.8%
3944710 101.1.2.85 ↗ alpha arrays › HTH › HTH › winged helix domain › TraI_2_C 0.71 59.0 5.74e-01 89.9% 89.2%
3804069 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.70 44.0 4.73e-01 93.6% 72.6%
5059917 101.1.2.279 ↗ alpha arrays › HTH › HTH › winged helix domain › AbiEi_4 0.70 41.0 5.06e-01 89.9% 96.9%
4018994 101.1.2.499 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 0.70 50.0 5.70e-01 89.9% 100.0%
3797719 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 4.93e-01 94.5% 74.8%
3515383 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.65 48.0 5.05e-01 93.6% 85.0%
4964272 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 41.0 4.25e-01 95.4% 69.5%
3257842 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 5.05e-01 93.6% 83.1%
5010731 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 3.81e-01 96.3% 48.1%
3955994 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 42.0 4.67e-01 95.4% 91.8%
4334068 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 46.0 5.01e-01 91.7% 98.9%
3337440 101.1.2.497 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25874 0.60 43.0 4.74e-01 90.8% 96.5%
3319006 101.1.2.497 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25874 0.59 46.0 4.62e-01 98.2% 81.8%
3887336 101.1.4.12 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.59 49.0 3.90e-01 90.8% 48.9%
3368421 101.1.2.497 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25874 0.59 46.0 4.39e-01 98.2% 72.0%
3731219 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.59 48.0 4.63e-01 90.8% 76.8%
3516107 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.59 43.0 4.30e-01 89.0% 73.9%
3813507 101.1.2.278 ↗ alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.58 42.0 3.99e-01 89.0% 62.3%
3542800 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.58 44.0 3.39e-01 90.8% 34.5%
3786640 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.58 43.0 4.30e-01 94.5% 74.8%
4033119 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.58 34.0 3.59e-01 74.3% 63.0%
5049735 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.57 48.0 3.33e-01 94.5% 27.8%
3699618 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.74e-01 93.6% 100.0%
3843442 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.56 42.0 4.11e-01 89.0% 70.4%
4323483 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 3.89e-01 92.7% 58.1%
3216573 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 4.31e-01 89.9% 75.2%
5038689 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 4.32e-01 96.3% 87.0%
3784677 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.54 41.0 3.24e-01 90.8% 39.1%
3702324 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 4.56e-01 92.7% 97.0%
3632939 101.1.9.80 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › YOL029C_N 0.54 38.0 3.98e-01 81.7% 81.0%
3491623 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 42.0 4.05e-01 97.2% 76.0%
185814 101.1.4.12 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.51 38.0 4.16e-01 90.8% 100.0%
D5 medium residues 426-500
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lsjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.73 60.0 4.73e-01 89.3% 63.4%
1nxuA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.70 52.0 5.10e-01 77.3% 78.5%
1xrhD01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.70 52.0 4.65e-01 78.7% 59.2%
4jndA01 1.10.1740.220 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.69 52.0 4.24e-01 78.7% 69.2%
4cxfA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.68 57.0 5.52e-01 94.7% 89.7%
4h8aB01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.67 49.0 5.39e-01 77.3% 100.0%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.66 50.0 4.73e-01 82.7% 93.4%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 46.0 4.22e-01 73.3% 63.9%
3on2A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 50.0 3.80e-01 88.0% 47.4%
2b9rA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 46.0 3.71e-01 76.0% 79.3%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.63 39.0 4.44e-01 72.0% 85.5%
2rjiA00 1.10.1740.170 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Erythrocyte binding antigen 175 region VI 0.63 46.0 4.47e-01 78.7% 75.0%
1r6bX03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 45.0 4.29e-01 77.3% 77.3%
1dcnA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.61 43.0 4.40e-01 73.3% 76.4%
3f0cA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 49.0 4.04e-01 90.7% 63.9%
5ts9B00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.61 47.0 3.71e-01 84.0% 55.3%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.61 44.0 3.92e-01 77.3% 59.1%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.60 47.0 3.89e-01 88.0% 48.3%
6jlzA01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.60 44.0 3.93e-01 78.7% 91.7%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.59 47.0 3.91e-01 89.3% 61.7%
2scpA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 43.0 3.35e-01 77.3% 48.3%
2gbbB00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.58 45.0 3.64e-01 85.3% 81.9%
1jkwA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 46.0 4.24e-01 88.0% 79.2%
6b8hO01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.57 36.0 3.31e-01 73.3% 47.5%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 42.0 3.53e-01 77.3% 55.9%
4efcA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.57 34.0 3.64e-01 72.0% 70.5%
1f5qB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 47.0 4.27e-01 97.3% 67.0%
2zxqA06 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.56 39.0 4.08e-01 70.7% 84.8%
3kzhB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 48.0 3.26e-01 100.0% 91.1%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.56 46.0 4.38e-01 97.3% 83.0%
6w6jD01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.56 46.0 3.95e-01 97.3% 58.8%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.54 39.0 3.37e-01 76.0% 57.3%
2w0gA00 1.20.58.610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain 0.54 37.0 3.22e-01 73.3% 58.1%
1qzmA00 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 43.0 4.09e-01 92.0% 75.5%
4u04A02 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.52 41.0 3.04e-01 92.0% 50.2%
7nadx01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 2.88e-01 82.7% 90.5%
5k7fA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 39.0 3.35e-01 89.3% 58.0%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3962155 191.1.1.49 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_13_2 0.76 60.0 5.82e-01 86.7% 88.2%
3960067 191.1.1.49 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_13_2 0.74 58.0 5.95e-01 84.0% 100.0%
3282525 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.72 60.0 5.23e-01 92.0% 72.2%
3960341 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.71 58.0 5.03e-01 90.7% 71.7%
3289695 191.1.1.54 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_32 0.71 60.0 4.71e-01 94.7% 55.6%
3281444 191.1.1.26 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 0.69 58.0 4.76e-01 92.0% 65.9%
3930750 142.1.1.36 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › C_tripleX 0.69 54.0 5.43e-01 85.3% 100.0%
3290357 191.1.1.10 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_6 0.69 57.0 4.86e-01 92.0% 68.8%
2389466 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.69 56.0 5.38e-01 89.3% 87.1%
3960139 191.1.1.26 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 0.69 53.0 5.01e-01 84.0% 84.4%
3279396 191.1.1.55 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_15 0.68 55.0 4.54e-01 88.0% 56.3%
3166682 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.68 46.0 4.17e-01 73.3% 52.0%
3398929 5041.1.1.32 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 0.68 47.0 4.41e-01 72.0% 62.2%
5039929 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.65 51.0 3.61e-01 94.7% 27.4%
4031192 632.19.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.65 45.0 4.62e-01 72.0% 97.1%
4461864 172.2.1.1 ↗ alpha complex topology › Citrate synthase-like › Urease accessory protein ureF › Urease accessory protein ureF › UreF 0.65 47.0 3.40e-01 78.7% 60.4%
5003681 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.64 46.0 2.91e-01 76.0% 23.4%
3186578 101.38.1.2 ↗ alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › DUF7721 0.63 48.0 3.95e-01 82.7% 94.3%
3186842 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.63 51.0 3.30e-01 90.7% 93.9%
3507767 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.63 46.0 4.26e-01 77.3% 74.7%
3277203 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 49.0 3.89e-01 86.7% 48.4%
4031191 632.19.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.61 43.0 4.39e-01 74.7% 92.0%
5026768 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.60 47.0 4.07e-01 82.7% 70.9%
3938097 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.59 40.0 3.47e-01 72.0% 45.2%
3261075 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 40.0 2.59e-01 70.7% 61.9%
3929290 614.1.1.0 ↗ alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain 0.58 46.0 4.72e-01 86.7% 98.6%
143744 191.1.1.40 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_40 0.58 45.0 4.03e-01 89.3% 60.7%
3998584 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.58 48.0 4.15e-01 96.0% 60.8%
3644932 5069.1.3.62 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Mito_carr 0.58 45.0 3.85e-01 85.3% 74.4%
3406162 4006.1.1.13 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › DUF842 0.57 40.0 3.43e-01 73.3% 84.0%
3438234 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.56 37.0 3.88e-01 70.7% 75.4%
3616679 2498.1.1.9 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 0.56 44.0 3.10e-01 88.0% 63.4%
3249600 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.56 48.0 3.77e-01 97.3% 47.9%
5063791 1075.3.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.56 42.0 2.84e-01 85.3% 63.0%
4938389 101.1.2.951 ↗ alpha arrays › HTH › HTH › winged helix domain › PF29259 0.54 37.0 3.02e-01 70.7% 64.8%
3992117 283.1.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.54 37.0 2.84e-01 70.7% 28.9%
4612393 7579.1.1.234 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF6792 0.54 38.0 2.65e-01 76.0% 47.4%
3414426 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 41.0 2.97e-01 85.3% 87.6%
5016128 3843.1.1.6 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF 0.53 43.0 4.32e-01 89.3% 98.7%
4031490 632.2.1.5 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1542 0.52 38.0 3.85e-01 76.0% 94.7%
3261579 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.52 44.0 3.53e-01 98.7% 55.8%
1935038 191.1.1.26 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 0.51 38.0 3.55e-01 88.0% 73.1%