←Back to structures
MT980838.1__QOI66166.1__X__00022
Bact-VirMT980838.1__QOI66166.1__X__00022
Identity
- Accession:
- MT980838 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Taxonomy
TaxID: 2772519
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-128
Domain cluster:
rep: MT521999.1__QLF84184.1__SEA_JABLANSKI_44__00044__D3-107
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14472.12 best | DUF4429 | 33.2 | 9.20e-08 | 77.1% | 95.8% |
D2
medium
residues 140-169
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09851.15 best | SHOCT | 36.8 | 3.20e-09 | 93.3% | 100.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.97 | 87.0 | 5.61e-01 | 100.0% | 25.6% |
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.96 | 84.0 | 7.97e-01 | 100.0% | 83.3% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.92 | 77.0 | 5.23e-01 | 100.0% | 27.5% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.92 | 77.0 | 6.19e-01 | 100.0% | 50.0% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.91 | 77.0 | 5.13e-01 | 100.0% | 26.3% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.91 | 77.0 | 5.13e-01 | 100.0% | 26.5% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.90 | 74.0 | 5.55e-01 | 100.0% | 38.5% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.89 | 73.0 | 5.97e-01 | 100.0% | 50.0% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 71.0 | 5.98e-01 | 100.0% | 58.5% |
| 6v3zA00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.83 | 65.0 | 4.08e-01 | 100.0% | 16.3% |
| 6dv2G02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.83 | 70.0 | 4.28e-01 | 100.0% | 16.3% |
| 2x0sA04 | 1.10.189.10 | Mainly Alpha › Orthogonal Bundle › Pyruvate Phosphate di-kinase; domain 2 › Pyruvate Phosphate Dikinase, domain 2 | 0.81 | 66.0 | 5.29e-01 | 100.0% | 47.7% |
| 2n7zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.81 | 61.0 | 4.35e-01 | 96.7% | 32.1% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.78 | 63.0 | 4.61e-01 | 96.7% | 34.5% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.75 | 63.0 | 3.76e-01 | 96.7% | 13.4% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.75 | 60.0 | 5.28e-01 | 100.0% | 66.0% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.73 | 58.0 | 4.49e-01 | 100.0% | 41.8% |
| 2a8pA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.69 | 58.0 | 3.56e-01 | 100.0% | 18.2% |
| 2w48B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 52.0 | 4.44e-01 | 90.0% | 69.2% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 50.0 | 4.17e-01 | 100.0% | 50.7% |
| 2kkmA01 | 1.20.1440.170 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like | 0.59 | 41.0 | 3.04e-01 | 100.0% | 23.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975170 | 2485.1.1.6 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP | 0.97 | 87.0 | 4.98e-01 | 100.0% | 12.5% |
| 3188198 | 3151.1.1.0 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 | 0.96 | 87.0 | 7.85e-01 | 100.0% | 75.0% |
| 3539738 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.96 | 84.0 | 4.89e-01 | 100.0% | 13.3% |
| 3616228 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.95 | 84.0 | 4.81e-01 | 100.0% | 12.2% |
| 5036455 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.91 | 77.0 | 4.37e-01 | 100.0% | 10.3% |
| 3555742 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.89 | 74.0 | 5.37e-01 | 100.0% | 36.5% |
| 3281008 | 4299.1.1.0 ↗ | alpha arrays › BSD domain › BSD domain › BSD domain | 0.89 | 73.0 | 7.08e-01 | 100.0% | 85.7% |
| 3663440 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.79 | 64.0 | 3.46e-01 | 100.0% | 5.5% |