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MV_entry-fusion_complex_protein
Euk-VirCotia_virus_SPAn232
MV_entry-fusion_complex_protein__YP_005296263__Cotia_virus_SPAn232__930275
Identity
- Accession:
- YP_005296263 ↗
- Protein ID:
- MV_entry-fusion_complex_protein
- Kingdom:
- euk
Quality
85.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Oryzopoxvirus›
Cotia_virus_SPAn232
TaxID: 930275
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-124
Domain cluster:
rep: Entry_fusion_complex_component__YP_009480597__Sea_otter_poxvirus__1416741__D22-115
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ci9C01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.67 | 46.0 | 3.30e-01 | 70.9% | 89.8% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 43.0 | 4.81e-01 | 91.3% | 97.4% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.61 | 32.0 | 3.80e-01 | 70.9% | 74.3% |
| 2h1yA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.60 | 32.0 | 3.75e-01 | 72.8% | 74.3% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 41.0 | 4.61e-01 | 72.8% | 96.0% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.60 | 32.0 | 3.84e-01 | 70.9% | 79.1% |
| 2uv8A06 | 3.30.70.2490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 32.0 | 3.74e-01 | 72.8% | 77.6% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.58 | 42.0 | 3.97e-01 | 81.6% | 63.7% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.57 | 44.0 | 3.52e-01 | 83.5% | 69.8% |
| 2jtvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 32.0 | 3.86e-01 | 88.3% | 90.8% |
| 7z47G01 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 36.0 | 4.26e-01 | 87.4% | 100.0% |
| 3pqvC01 | 3.65.10.20 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain | 0.53 | 45.0 | 3.42e-01 | 94.2% | 46.7% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 40.0 | 3.74e-01 | 82.5% | 93.7% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.40e-01 | 81.6% | 64.8% |
| 2wbrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 30.0 | 3.16e-01 | 70.9% | 64.0% |
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.33e-01 | 82.5% | 59.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740807 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.65 | 47.0 | 5.06e-01 | 86.4% | 90.6% |
| 4218542 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.64 | 34.0 | 4.38e-01 | 72.8% | 90.0% |
| 3711102 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.64 | 44.0 | 4.52e-01 | 85.4% | 74.0% |
| 4361828 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 43.0 | 4.32e-01 | 85.4% | 68.6% |
| 3198781 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 49.0 | 5.24e-01 | 87.4% | 100.0% |
| 4365938 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.62 | 48.0 | 5.14e-01 | 89.3% | 100.0% |
| 3254258 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.62 | 33.0 | 3.97e-01 | 70.9% | 80.0% |
| 4012905 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.62 | 48.0 | 5.12e-01 | 89.3% | 100.0% |
| 3308590 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.62 | 45.0 | 4.57e-01 | 89.3% | 78.0% |
| 4121833 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.61 | 46.0 | 4.99e-01 | 92.2% | 97.6% |
| 2985023 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.61 | 32.0 | 3.58e-01 | 70.9% | 63.4% |
| 3260870 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 41.0 | 4.39e-01 | 85.4% | 80.0% |
| 1833373 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.60 | 32.0 | 3.77e-01 | 72.8% | 76.5% |
| 4023193 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.60 | 32.0 | 3.87e-01 | 71.8% | 80.0% |
| 3795358 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 36.0 | 4.11e-01 | 71.8% | 82.7% |
| 3507104 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.59 | 41.0 | 3.44e-01 | 70.9% | 90.6% |
| 5054189 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 31.0 | 3.86e-01 | 87.4% | 86.7% |
| 3595328 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.58 | 43.0 | 4.31e-01 | 86.4% | 76.2% |
| 1875302 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 44.0 | 3.61e-01 | 88.3% | 78.4% |
| 4588030 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.54 | 47.0 | 3.69e-01 | 99.0% | 68.4% |
| 3280113 | 2003.1.5.145 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RLMG_N | 0.53 | 43.0 | 3.54e-01 | 88.3% | 85.3% |
| 4955420 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 42.0 | 3.22e-01 | 88.3% | 89.4% |
| 3797043 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 38.0 | 3.91e-01 | 88.3% | 83.8% |
| 5015450 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.51 | 35.0 | 3.91e-01 | 82.5% | 92.5% |
| 3386110 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.51 | 40.0 | 4.26e-01 | 95.1% | 100.0% |
| 4011340 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 32.0 | 2.93e-01 | 73.8% | 45.5% |
D2
medium
residues 130-266
Domain cluster:
rep: entry-fusion_complex_component,_myristylprotein__YP_008004471__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D124-261
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03003.22 best | Pox_G9-A16 | 64.2 | 1.40e-17 | 46.0% | 48.4% |