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MW006477.1__QPI14551.1__GECvBMG_gp007__00007
Bact-VirMW006477.1__QPI14551.1__GECvBMG_gp007__00007
Identity
- Accession:
- MW006477 ↗
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Taxonomy
TaxID: 2777376
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-92
Domain cluster:
rep: MH533020.1__AXN57917.1__X__00186__D2-86
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.65 | 49.0 | 4.43e-01 | 80.7% | 96.5% |
| 1bp1A01 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.64 | 56.0 | 4.42e-01 | 100.0% | 92.8% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.63 | 39.0 | 3.59e-01 | 75.9% | 47.7% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.62 | 45.0 | 3.48e-01 | 98.8% | 34.0% |
| 3f9sB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 39.0 | 3.26e-01 | 71.1% | 38.3% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 39.0 | 2.90e-01 | 98.8% | 23.8% |
| 1hwyA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.60 | 51.0 | 4.26e-01 | 95.2% | 67.1% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.59 | 35.0 | 3.14e-01 | 75.9% | 39.8% |
| 1bvuA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.59 | 50.0 | 4.18e-01 | 95.2% | 67.8% |
| 2e1qC08 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.58 | 51.0 | 4.11e-01 | 100.0% | 65.3% |
| 6nffA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 51.0 | 3.44e-01 | 98.8% | 44.8% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.57 | 33.0 | 3.86e-01 | 74.7% | 93.8% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.57 | 40.0 | 4.14e-01 | 72.3% | 79.2% |
| 1vmeB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 44.0 | 3.12e-01 | 83.1% | 92.0% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 36.0 | 2.73e-01 | 98.8% | 23.5% |
| 1ffvB02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.55 | 39.0 | 3.25e-01 | 90.4% | 42.1% |
| 7xgtA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 41.0 | 2.91e-01 | 80.7% | 26.4% |
| 4zohA02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 39.0 | 3.37e-01 | 90.4% | 47.4% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 48.0 | 3.14e-01 | 98.8% | 28.2% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.53 | 47.0 | 3.64e-01 | 100.0% | 61.4% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 34.0 | 2.91e-01 | 73.5% | 38.2% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.52 | 40.0 | 3.39e-01 | 85.5% | 73.8% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.52 | 38.0 | 3.21e-01 | 77.1% | 76.1% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 35.0 | 3.11e-01 | 77.1% | 47.6% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 33.0 | 2.88e-01 | 89.2% | 39.3% |
| 1wubA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.51 | 44.0 | 3.52e-01 | 100.0% | 65.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993562 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 50.0 | 4.61e-01 | 86.7% | 67.6% |
| 4144216 | 5084.5.1.63 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Coleoptericin | 0.61 | 37.0 | 2.52e-01 | 71.1% | 17.7% |
| 3445028 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 35.0 | 3.58e-01 | 84.3% | 61.3% |
| 3688162 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.56 | 47.0 | 3.27e-01 | 95.2% | 32.4% |
| 3385471 | 4998.1.1.0 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain | 0.55 | 47.0 | 3.96e-01 | 97.6% | 76.6% |
| 3967957 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.55 | 41.0 | 2.69e-01 | 80.7% | 58.4% |
| 3927151 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 30.0 | 2.30e-01 | 71.1% | 19.7% |
| 3981414 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.53 | 37.0 | 2.43e-01 | 73.5% | 55.9% |
| 3385695 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.53 | 34.0 | 3.63e-01 | 80.7% | 75.7% |
| 3387739 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.53 | 46.0 | 3.54e-01 | 97.6% | 57.4% |
| 3352475 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.53 | 35.0 | 3.74e-01 | 81.9% | 77.3% |
| 3437088 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 46.0 | 3.50e-01 | 97.6% | 66.2% |
| 3777916 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.52 | 39.0 | 2.97e-01 | 96.4% | 31.6% |
| 3758281 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 41.0 | 3.20e-01 | 86.7% | 91.7% |
| 3850124 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 38.0 | 2.93e-01 | 80.7% | 75.6% |
| 3527281 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 41.0 | 3.16e-01 | 86.7% | 89.7% |
| 3171429 | 220.1.1.169 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_26 | 0.51 | 42.0 | 3.47e-01 | 94.0% | 89.1% |
| 3790745 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 39.0 | 3.05e-01 | 83.1% | 79.5% |
| 3799364 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 38.0 | 2.91e-01 | 79.5% | 93.7% |
| 3784480 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.50 | 38.0 | 2.76e-01 | 94.0% | 27.2% |
| 3210232 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.50 | 38.0 | 2.77e-01 | 95.2% | 27.6% |