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MW015081.1__QPX48081.1__X__00116
Bact-VirMW015081.1__QPX48081.1__X__00116
Identity
- Accession:
- MW015081 ↗
- Kingdom:
- phage
Quality
96.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Serangoonvirus›
Synechococcus_phage_S-SRM01
TaxID: 2781608
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-68
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01327.27 best | Pep_deformylase | 56.0 | 5.00e-15 | 100.0% | 41.0% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rl4B00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.98 | 86.0 | 6.26e-01 | 98.5% | 39.7% |
| 1lmeA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.97 | 93.0 | 6.81e-01 | 100.0% | 44.2% |
| 3u04A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.96 | 93.0 | 6.57e-01 | 100.0% | 44.8% |
| 1zxzB00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.95 | 90.0 | 6.24e-01 | 100.0% | 47.1% |
| 3g5kA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.94 | 89.0 | 6.26e-01 | 100.0% | 49.2% |
| 3qu1A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.93 | 89.0 | 6.38e-01 | 100.0% | 42.3% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.93 | 89.0 | 6.33e-01 | 100.0% | 47.4% |
| 3e3uA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.92 | 87.0 | 6.01e-01 | 100.0% | 40.8% |
| 5mteA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.92 | 86.0 | 6.58e-01 | 100.0% | 48.9% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.89 | 83.0 | 5.84e-01 | 100.0% | 47.4% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.71 | 46.0 | 5.48e-01 | 100.0% | 97.8% |
| 4r60A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.64 | 44.0 | 3.34e-01 | 72.1% | 48.1% |
| 3v97A03 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.60 | 40.0 | 3.79e-01 | 72.1% | 56.5% |
| 2a90A02 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 40.0 | 4.22e-01 | 70.6% | 82.0% |
| 1ia9A02 | 3.20.200.10 | Alpha Beta › Alpha-Beta Barrel › Protein kinase-like fold › MHCK/EF2 kinase | 0.53 | 37.0 | 3.27e-01 | 73.5% | 89.6% |
| 5jolA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 35.0 | 3.37e-01 | 70.6% | 96.3% |
| 1chmA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.51 | 36.0 | 2.86e-01 | 75.0% | 50.3% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4420329 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 94.0 | 6.55e-01 | 100.0% | 42.7% |
| 4039287 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 94.0 | 6.69e-01 | 100.0% | 41.8% |
| 4256308 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.97 | 94.0 | 6.79e-01 | 100.0% | 44.4% |
| 140542 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.97 | 93.0 | 6.51e-01 | 100.0% | 45.8% |
| 4275485 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.58e-01 | 100.0% | 41.2% |
| 3966296 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.96 | 93.0 | 6.64e-01 | 100.0% | 43.0% |
| 4470382 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.47e-01 | 100.0% | 45.6% |
| 4539518 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 93.0 | 6.38e-01 | 100.0% | 45.8% |
| 4030761 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 91.0 | 6.64e-01 | 100.0% | 43.1% |
| 4096233 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.50e-01 | 100.0% | 43.7% |
| 2579249 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 91.0 | 6.64e-01 | 100.0% | 50.9% |
| 3427612 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 91.0 | 6.35e-01 | 100.0% | 39.5% |
| 3309735 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 91.0 | 7.09e-01 | 100.0% | 56.6% |
| 1877349 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 91.0 | 6.51e-01 | 100.0% | 45.6% |
| 981342 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 91.0 | 6.35e-01 | 100.0% | 40.1% |
| 4422867 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 90.0 | 6.27e-01 | 100.0% | 38.4% |
| 168447 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 90.0 | 6.30e-01 | 100.0% | 39.7% |
| 4133607 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 90.0 | 6.55e-01 | 100.0% | 43.1% |
| 3336542 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 89.0 | 7.26e-01 | 100.0% | 78.3% |
| 3693404 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 89.0 | 6.19e-01 | 100.0% | 40.0% |
| 3440362 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 89.0 | 6.18e-01 | 100.0% | 47.4% |
| 4628922 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 89.0 | 6.28e-01 | 100.0% | 45.8% |
| 3401134 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 88.0 | 6.16e-01 | 100.0% | 47.6% |
| 4325293 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 88.0 | 6.19e-01 | 100.0% | 47.6% |
| 4165265 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 88.0 | 6.01e-01 | 100.0% | 41.7% |
| 4999343 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 88.0 | 6.35e-01 | 100.0% | 44.2% |
| 2121396 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 87.0 | 6.65e-01 | 100.0% | 48.9% |
| 4220709 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 88.0 | 6.29e-01 | 100.0% | 43.5% |
| 3276058 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 87.0 | 6.25e-01 | 100.0% | 48.2% |
| 170021 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 87.0 | 6.01e-01 | 100.0% | 40.8% |
| 4443928 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 87.0 | 6.03e-01 | 100.0% | 37.4% |
| 4224338 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 86.0 | 6.01e-01 | 100.0% | 44.7% |
| 4086694 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 86.0 | 6.40e-01 | 100.0% | 46.0% |
| 3607053 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 85.0 | 5.55e-01 | 100.0% | 27.8% |
| 3710708 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 83.0 | 5.74e-01 | 100.0% | 37.1% |
| 3596563 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.90 | 85.0 | 5.75e-01 | 100.0% | 32.4% |
| 167197 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 5.76e-01 | 100.0% | 47.8% |
| 3987299 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.89 | 81.0 | 6.29e-01 | 100.0% | 48.9% |
| 4454013 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.88 | 82.0 | 5.86e-01 | 100.0% | 49.4% |
| 4220705 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.88 | 81.0 | 5.81e-01 | 100.0% | 46.1% |
| 4336204 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.87 | 78.0 | 5.60e-01 | 98.5% | 49.7% |
| 4215094 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.83 | 76.0 | 5.46e-01 | 100.0% | 45.4% |
| 4304576 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.83 | 76.0 | 5.38e-01 | 100.0% | 45.1% |
| 4588602 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.72 | 47.0 | 5.40e-01 | 86.8% | 92.0% |
| 3961969 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.64 | 45.0 | 4.80e-01 | 92.6% | 83.3% |
| 3431346 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.57 | 49.0 | 3.14e-01 | 94.1% | 74.4% |
| 3705224 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 42.0 | 3.78e-01 | 77.9% | 87.8% |
| 4052309 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.56 | 48.0 | 4.10e-01 | 98.5% | 78.3% |
| 5052070 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.55 | 48.0 | 4.24e-01 | 97.1% | 79.0% |
| 4048866 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.54 | 47.0 | 3.70e-01 | 100.0% | 50.0% |
| 3960379 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.53 | 46.0 | 4.25e-01 | 100.0% | 74.4% |
| 3452406 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.53 | 44.0 | 3.74e-01 | 91.2% | 97.3% |
| 3911241 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 41.0 | 3.61e-01 | 85.3% | 74.0% |
| 4972588 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.52 | 43.0 | 2.88e-01 | 100.0% | 30.2% |
D2
medium
residues 69-144
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01327.27 best | Pep_deformylase | 80.4 | 1.60e-22 | 100.0% | 48.1% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u04A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.97 | 92.0 | 6.76e-01 | 98.7% | 43.6% |
| 1rl4B00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.96 | 93.0 | 7.00e-01 | 100.0% | 48.7% |
| 5mteA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.96 | 85.0 | 6.75e-01 | 92.1% | 51.1% |
| 3qu1A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.96 | 89.0 | 6.60e-01 | 98.7% | 44.0% |
| 1lmeA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.96 | 92.0 | 6.97e-01 | 100.0% | 49.4% |
| 1zxzB00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.94 | 90.0 | 6.42e-01 | 100.0% | 39.8% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.93 | 88.0 | 6.51e-01 | 100.0% | 44.4% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.92 | 87.0 | 6.25e-01 | 100.0% | 41.6% |
| 3g5kA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.91 | 86.0 | 6.25e-01 | 100.0% | 41.5% |
| 3e3uA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.87 | 82.0 | 5.89e-01 | 100.0% | 41.3% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.80 | 41.0 | 4.40e-01 | 88.2% | 57.6% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 35.0 | 3.67e-01 | 86.8% | 62.7% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.58 | 41.0 | 3.71e-01 | 75.0% | 90.7% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 43.0 | 3.96e-01 | 82.9% | 77.6% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 33.0 | 3.03e-01 | 97.4% | 42.6% |
| 1aqcB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 34.0 | 2.97e-01 | 88.2% | 36.1% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 37.0 | 3.21e-01 | 88.2% | 42.3% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 39.0 | 3.68e-01 | 75.0% | 100.0% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.55 | 34.0 | 3.02e-01 | 98.7% | 43.2% |
| 4bq6F00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 41.0 | 3.39e-01 | 84.2% | 99.3% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 40.0 | 3.74e-01 | 80.3% | 80.0% |
| 4dxkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 33.0 | 2.86e-01 | 86.8% | 37.6% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 41.0 | 3.58e-01 | 88.2% | 80.8% |
| 3buxB03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 39.0 | 3.82e-01 | 92.1% | 70.9% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.52 | 41.0 | 2.58e-01 | 100.0% | 14.5% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 42.0 | 3.68e-01 | 100.0% | 99.2% |
| 6qj2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.32e-01 | 72.4% | 81.5% |
| 1q15A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.50 | 39.0 | 2.93e-01 | 86.8% | 42.4% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4256308 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 93.0 | 6.93e-01 | 98.7% | 46.3% |
| 4086694 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 93.0 | 7.13e-01 | 98.7% | 50.0% |
| 4275485 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 95.0 | 6.94e-01 | 100.0% | 44.7% |
| 4039287 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 93.0 | 6.85e-01 | 100.0% | 44.1% |
| 2579249 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.98 | 93.0 | 6.97e-01 | 100.0% | 47.2% |
| 4096233 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.97 | 93.0 | 6.76e-01 | 100.0% | 43.1% |
| 4133607 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.97 | 92.0 | 6.90e-01 | 98.7% | 46.9% |
| 140542 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.97 | 92.0 | 6.65e-01 | 98.7% | 41.9% |
| 3427612 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.97 | 93.0 | 6.67e-01 | 100.0% | 41.1% |
| 4224338 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 93.0 | 6.60e-01 | 100.0% | 40.0% |
| 2121396 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 85.0 | 6.75e-01 | 92.1% | 51.1% |
| 168447 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.65e-01 | 100.0% | 41.3% |
| 981342 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 93.0 | 6.67e-01 | 100.0% | 41.8% |
| 4470382 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 91.0 | 6.59e-01 | 98.7% | 41.7% |
| 4325293 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.63e-01 | 100.0% | 41.6% |
| 4030761 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 93.0 | 6.93e-01 | 100.0% | 47.5% |
| 4220709 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 93.0 | 6.81e-01 | 100.0% | 44.7% |
| 4422867 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 91.0 | 6.48e-01 | 100.0% | 39.5% |
| 4420329 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.62e-01 | 100.0% | 41.1% |
| 4999343 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.96 | 92.0 | 6.84e-01 | 100.0% | 46.7% |
| 3987299 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 81.0 | 6.43e-01 | 90.8% | 49.6% |
| 3276058 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.95 | 87.0 | 6.46e-01 | 100.0% | 42.9% |
| 3966296 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.95 | 91.0 | 6.77e-01 | 100.0% | 46.1% |
| 4539518 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 90.0 | 6.40e-01 | 100.0% | 40.5% |
| 3440362 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 89.0 | 6.39e-01 | 100.0% | 40.0% |
| 3401134 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 89.0 | 6.37e-01 | 100.0% | 40.2% |
| 1877349 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 89.0 | 6.59e-01 | 100.0% | 45.0% |
| 3607053 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 90.0 | 5.97e-01 | 100.0% | 42.0% |
| 4454013 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 89.0 | 6.45e-01 | 100.0% | 43.9% |
| 4165265 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 89.0 | 6.22e-01 | 100.0% | 37.3% |
| 4220705 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.93 | 87.0 | 6.36e-01 | 98.7% | 45.0% |
| 3596563 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.92 | 88.0 | 6.15e-01 | 100.0% | 49.0% |
| 4113678 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 88.0 | 6.35e-01 | 100.0% | 42.9% |
| 4628922 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 88.0 | 6.40e-01 | 100.0% | 42.5% |
| 3693404 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 88.0 | 6.27e-01 | 100.0% | 49.5% |
| 4336204 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 86.0 | 6.23e-01 | 98.7% | 40.5% |
| 3710708 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 88.0 | 6.15e-01 | 100.0% | 39.5% |
| 167197 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 87.0 | 6.11e-01 | 100.0% | 38.5% |
| 4443928 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.89 | 85.0 | 6.09e-01 | 100.0% | 48.4% |
| 170021 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.87 | 82.0 | 5.89e-01 | 100.0% | 41.3% |
| 4654713 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.69 | 43.0 | 3.44e-01 | 89.5% | 32.4% |
| 3238035 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 41.0 | 4.80e-01 | 88.2% | 96.0% |
| 3383138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 42.0 | 4.26e-01 | 88.2% | 64.1% |
| 4657278 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.63 | 34.0 | 3.24e-01 | 80.3% | 42.2% |
| 3379810 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 34.0 | 3.77e-01 | 82.9% | 66.7% |
| 4929364 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.57 | 36.0 | 3.87e-01 | 88.2% | 75.4% |
| 3789900 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.57 | 36.0 | 3.05e-01 | 88.2% | 36.3% |
| 4056773 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.56 | 39.0 | 3.82e-01 | 98.7% | 67.1% |
| 4881988 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.55 | 35.0 | 3.48e-01 | 86.8% | 61.5% |
| 3582308 | 220.1.1.16 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF1681 | 0.55 | 39.0 | 3.64e-01 | 89.5% | 60.0% |
| 3542914 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 43.0 | 3.76e-01 | 89.5% | 77.5% |
| 3719687 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 35.0 | 3.56e-01 | 88.2% | 68.0% |
| 3678038 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.54 | 37.0 | 3.72e-01 | 89.5% | 72.0% |
| 3342201 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.53 | 38.0 | 3.36e-01 | 85.5% | 50.4% |
| 4028996 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 38.0 | 3.17e-01 | 100.0% | 40.7% |
| 3718894 | 220.1.1.175 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_31 | 0.53 | 39.0 | 3.01e-01 | 81.6% | 84.5% |
| 3212968 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.52 | 34.0 | 2.86e-01 | 89.5% | 37.0% |
| 3831229 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.52 | 36.0 | 2.17e-01 | 71.1% | 83.0% |