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MW015081.1__QPX48297.1__X__00332
Bact-VirMW015081.1__QPX48297.1__X__00332
Identity
- Accession:
- MW015081 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Serangoonvirus›
Synechococcus_phage_S-SRM01
TaxID: 2781608
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 88-285
Domain cluster:
rep: OL674541.1__UIS24737.1__AXL1_47__00047__D264-427
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.59 | 51.0 | 4.68e-01 | 90.9% | 98.0% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 37.0 | 3.78e-01 | 89.9% | 67.9% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.56 | 34.0 | 4.10e-01 | 87.4% | 92.1% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 29.0 | 3.94e-01 | 76.8% | 96.1% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.55 | 44.0 | 4.19e-01 | 83.3% | 99.1% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.54 | 29.0 | 3.72e-01 | 77.8% | 90.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3239554 | 389.1.1.143 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › NIDO | 0.80 | 71.0 | 6.96e-01 | 92.9% | 100.0% |
| 3404834 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.75 | 27.0 | 4.33e-01 | 81.8% | 83.7% |
| 3562322 | 355.1.1.14 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PF30706 | 0.74 | 66.0 | 6.46e-01 | 91.9% | 98.6% |
| 3650598 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.62 | 46.0 | 4.35e-01 | 77.3% | 97.9% |
| 3275961 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.55 | 38.0 | 3.88e-01 | 98.5% | 69.5% |
| 4008277 | 5084.5.1.62 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27458 | 0.55 | 38.0 | 3.20e-01 | 89.4% | 42.8% |
| 4258148 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 46.0 | 4.35e-01 | 91.4% | 93.8% |
| 3538089 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.53 | 45.0 | 4.32e-01 | 90.9% | 95.7% |
| 3616431 | 5.1.4.103 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DCAF17 | 0.51 | 37.0 | 2.74e-01 | 72.7% | 35.4% |
| 3366063 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.50 | 37.0 | 3.88e-01 | 98.5% | 82.8% |
D2
medium
residues 1-74