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MW021754.1__QPX74222.1__X__00081
Bact-VirMW021754.1__QPX74222.1__X__00081
Identity
- Accession:
- MW021754 ↗
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_FrontPhageNews
TaxID: 2777360
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 100-154
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bthA00 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.70 | 41.0 | 2.91e-01 | 90.9% | 20.1% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 47.0 | 3.48e-01 | 72.7% | 87.1% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 43.0 | 3.67e-01 | 72.7% | 86.7% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 4.34e-01 | 89.1% | 74.4% |
| 3l86A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.62 | 43.0 | 2.78e-01 | 100.0% | 16.3% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.46e-01 | 72.7% | 87.1% |
| 8amzO01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 44.0 | 2.74e-01 | 81.8% | 25.0% |
| 1f0jA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.57 | 50.0 | 3.09e-01 | 100.0% | 60.7% |
| 3nrvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.20e-01 | 78.2% | 68.2% |
| 2b7oA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 2.93e-01 | 94.5% | 76.8% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.56 | 40.0 | 3.29e-01 | 78.2% | 65.7% |
| 8amzP01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 47.0 | 2.87e-01 | 98.2% | 25.6% |
| 2napA03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.53 | 37.0 | 2.51e-01 | 72.7% | 69.7% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.53 | 48.0 | 3.88e-01 | 100.0% | 94.2% |
| 1zs7A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.53 | 45.0 | 3.68e-01 | 96.4% | 73.1% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.54e-01 | 83.6% | 68.6% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.53 | 41.0 | 2.53e-01 | 90.9% | 24.5% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.52e-01 | 87.3% | 75.5% |
| 2b81C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.53 | 43.0 | 2.75e-01 | 94.5% | 55.8% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.33e-01 | 96.4% | 43.8% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.52 | 44.0 | 3.48e-01 | 92.7% | 49.6% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.52 | 46.0 | 3.61e-01 | 100.0% | 52.1% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.51 | 46.0 | 3.96e-01 | 100.0% | 76.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 36.0 | 2.81e-01 | 100.0% | 24.2% |
| 3717709 | 9001.1.1.1 ↗ | alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TRAM_LAG1_CLN8 | 0.62 | 53.0 | 3.51e-01 | 100.0% | 62.8% |
| 4049639 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.62 | 47.0 | 3.03e-01 | 83.6% | 40.4% |
| 1381789 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 36.0 | 3.88e-01 | 70.9% | 66.7% |
| 3646808 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.61 | 42.0 | 3.14e-01 | 70.9% | 51.2% |
| 4935756 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.59 | 31.0 | 3.13e-01 | 78.2% | 45.5% |
| 3526831 | 558.1.1.21 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › BRWD1_N | 0.57 | 35.0 | 3.11e-01 | 70.9% | 42.5% |
| 3696785 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 49.0 | 3.20e-01 | 100.0% | 34.3% |
| 4945882 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.55 | 44.0 | 4.14e-01 | 92.7% | 87.1% |
| 3996116 | 109.4.1.1968 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_KNTC1_2nd | 0.55 | 46.0 | 2.85e-01 | 98.2% | 25.9% |
| 4210617 | 101.1.10.13 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF3452 | 0.54 | 44.0 | 3.44e-01 | 100.0% | 75.2% |
| 1686019 | 2003.2.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin | 0.54 | 37.0 | 2.58e-01 | 72.7% | 77.9% |
| 5029394 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.54 | 46.0 | 3.15e-01 | 100.0% | 87.9% |
| None | — | 0.53 | 47.0 | 2.72e-01 | 100.0% | 12.4% | |
| 4088893 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 42.0 | 2.98e-01 | 87.3% | 53.1% |
| 4096952 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.53 | 46.0 | 3.65e-01 | 100.0% | 56.5% |
| 5029487 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.53 | 46.0 | 3.17e-01 | 100.0% | 88.3% |
| 5024287 | 103.5.1.11 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF2067 | 0.53 | 40.0 | 3.57e-01 | 80.0% | 92.0% |
| 4946546 | 304.139.1.3 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 | 0.53 | 37.0 | 2.44e-01 | 76.4% | 48.6% |
| 3450169 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.53 | 36.0 | 3.56e-01 | 70.9% | 91.7% |
| 3599809 | 3279.1.1.0 ↗ | alpha arrays › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases | 0.52 | 39.0 | 2.56e-01 | 81.8% | 19.6% |
| 3624973 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.52 | 43.0 | 3.92e-01 | 100.0% | 83.7% |
| 3903618 | 219.1.1.54 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 | 0.52 | 42.0 | 2.66e-01 | 87.3% | 33.8% |
| 4051681 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 41.0 | 3.11e-01 | 87.3% | 40.7% |
| 4395892 | 2003.1.5.54 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 | 0.52 | 42.0 | 2.71e-01 | 98.2% | 64.8% |
| 4090636 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 41.0 | 3.83e-01 | 87.3% | 77.1% |
| 4939346 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.51 | 44.0 | 3.67e-01 | 100.0% | 89.0% |
| 4183916 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.51 | 44.0 | 3.03e-01 | 100.0% | 92.1% |
| 4995595 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 40.0 | 2.61e-01 | 87.3% | 20.9% |
| 3227972 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.51 | 41.0 | 2.83e-01 | 100.0% | 86.0% |
| 4981808 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.51 | 40.0 | 3.58e-01 | 92.7% | 61.2% |
| 3278868 | 101.1.9.84 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 | 0.50 | 43.0 | 3.79e-01 | 100.0% | 77.6% |
D2
medium
residues 23-65_80-99
Domain cluster:
rep: MK798143.1__QDH45717.1__AAM37_gp46__00046__D4-54
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tmaJ00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.74 | 45.0 | 4.72e-01 | 71.4% | 68.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4262739 | 2007.2.5.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese, Rhodanese_C | 0.68 | 47.0 | 3.26e-01 | 71.4% | 22.0% |
| 3777921 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 41.0 | 2.53e-01 | 81.0% | 12.1% |
| 3227242 | 5001.1.1.60 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx | 0.57 | 48.0 | 3.10e-01 | 93.7% | 42.0% |
| 4268395 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.55 | 47.0 | 4.22e-01 | 96.8% | 82.0% |
| 4091699 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.55 | 46.0 | 3.97e-01 | 93.7% | 77.0% |
| 3743391 | 376.1.3.56 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF30811 | 0.54 | 39.0 | 3.55e-01 | 77.8% | 64.7% |