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MW021764.1__QPX75216.1__X__00042
Bact-VirMW021764.1__QPX75216.1__X__00042
Identity
- Accession:
- MW021764 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Taxonomy
TaxID: 2777348
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-31
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w40A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.75 | 56.0 | 3.29e-01 | 83.9% | 10.2% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 58.0 | 4.04e-01 | 100.0% | 80.7% |
| 2itmA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 51.0 | 3.07e-01 | 83.9% | 10.8% |
| 3t69A01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.69 | 52.0 | 3.98e-01 | 83.9% | 34.7% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 51.0 | 3.35e-01 | 83.9% | 18.0% |
| 6p2kB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 56.0 | 3.19e-01 | 100.0% | 25.8% |
| 2gupA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 50.0 | 3.64e-01 | 83.9% | 25.8% |
| 2zgoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 49.0 | 3.16e-01 | 83.9% | 32.3% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 52.0 | 4.27e-01 | 93.5% | 60.6% |
| 4r9iA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.66 | 47.0 | 2.76e-01 | 71.0% | 7.9% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 51.0 | 3.59e-01 | 100.0% | 91.9% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 49.0 | 3.61e-01 | 87.1% | 59.4% |
| 4hpqB00 | 2.60.270.60 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 | 0.66 | 52.0 | 3.67e-01 | 100.0% | 52.2% |
| 4htlA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 47.0 | 3.42e-01 | 83.9% | 25.0% |
| 1y9wA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 43.0 | 3.13e-01 | 74.2% | 22.1% |
| 7n0eB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.63 | 46.0 | 3.16e-01 | 83.9% | 44.3% |
| 1xc3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 44.0 | 3.27e-01 | 90.3% | 25.2% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 45.0 | 3.19e-01 | 80.6% | 41.5% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 46.0 | 3.15e-01 | 83.9% | 19.8% |
| 4o5fA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 42.0 | 2.95e-01 | 83.9% | 18.9% |
| 2wadA01 | 6.20.70.10 | Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › | 0.59 | 45.0 | 4.53e-01 | 90.3% | 93.3% |
| 6d6zA02 | 3.40.50.11440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain | 0.59 | 44.0 | 2.77e-01 | 96.8% | 77.1% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 42.0 | 3.93e-01 | 83.9% | 84.8% |
| 6uf3A00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.58 | 41.0 | 2.48e-01 | 83.9% | 15.0% |
| 6jx5A01 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.57 | 41.0 | 3.32e-01 | 87.1% | 41.3% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.57 | 42.0 | 3.40e-01 | 100.0% | 61.6% |
| 1cdcA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.37e-01 | 100.0% | 68.8% |
| 1yx2A02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.55 | 39.0 | 3.19e-01 | 96.8% | 60.5% |
| 2xssA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 39.0 | 2.69e-01 | 90.3% | 26.9% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 39.0 | 3.24e-01 | 93.5% | 76.4% |
| 1ta9B01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 38.0 | 2.64e-01 | 93.5% | 28.3% |
| 4jdeA01 | 2.60.40.3820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 34.0 | 2.53e-01 | 93.5% | 49.6% |
| 1wsrA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.51 | 38.0 | 3.00e-01 | 93.5% | 58.2% |
| 5h8yD02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.50 | 38.0 | 2.50e-01 | 96.8% | 41.9% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3352777 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.79 | 58.0 | 5.64e-01 | 80.6% | 82.9% |
| 4954974 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.76 | 56.0 | 3.34e-01 | 83.9% | 11.3% |
| 4944151 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.75 | 56.0 | 3.30e-01 | 90.3% | 10.4% |
| 3674397 | 2485.1.1.82 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › ATP-synt_10 | 0.75 | 53.0 | 3.76e-01 | 74.2% | 24.2% |
| 3324497 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.75 | 52.0 | 3.56e-01 | 74.2% | 20.0% |
| 3312089 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 55.0 | 3.88e-01 | 83.9% | 31.0% |
| 3718117 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.73 | 53.0 | 3.13e-01 | 83.9% | 12.0% |
| 4142511 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.72 | 56.0 | 3.13e-01 | 87.1% | 22.9% |
| 1760264 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.72 | 56.0 | 4.09e-01 | 90.3% | 36.8% |
| 3588825 | 2004.1.1.552 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T4SS-DNA_transf, TraG-D_C | 0.71 | 51.0 | 2.79e-01 | 74.2% | 4.5% |
| 4105313 | 3541.1.1.1 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 | 0.71 | 57.0 | 3.80e-01 | 100.0% | 55.6% |
| 3761389 | 10.32.1.20 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA | 0.71 | 58.0 | 3.91e-01 | 100.0% | 72.3% |
| 3849127 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 50.0 | 4.30e-01 | 71.0% | 44.0% |
| 3247905 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.69 | 48.0 | 2.93e-01 | 80.6% | 10.7% |
| 3442291 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.69 | 51.0 | 2.83e-01 | 83.9% | 71.3% |
| 3233673 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.69 | 48.0 | 2.86e-01 | 83.9% | 9.3% |
| 3422502 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.68 | 49.0 | 3.52e-01 | 83.9% | 28.6% |
| 3994857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 53.0 | 4.51e-01 | 90.3% | 98.2% |
| 4061262 | 3541.1.1.1 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 | 0.67 | 53.0 | 3.59e-01 | 100.0% | 61.4% |
| 3175567 | 3541.1.1.1 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 | 0.67 | 53.0 | 3.81e-01 | 100.0% | 50.0% |
| 3274536 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.67 | 52.0 | 3.74e-01 | 90.3% | 55.0% |
| 5055290 | 244.4.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 | 0.66 | 49.0 | 3.96e-01 | 83.9% | 47.1% |
| 3652038 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.66 | 48.0 | 3.57e-01 | 71.0% | 25.9% |
| 4015084 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.66 | 54.0 | 3.36e-01 | 93.5% | 41.2% |
| 5056704 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.65 | 47.0 | 2.69e-01 | 80.6% | 6.7% |
| 4159886 | 3541.1.1.1 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG31 | 0.65 | 51.0 | 3.47e-01 | 100.0% | 58.0% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.65 | 52.0 | 4.22e-01 | 96.8% | 74.3% |
| 1179567 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.64 | 45.0 | 3.62e-01 | 71.0% | 31.9% |
| 3993195 | 859.1.1.0 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 | 0.63 | 48.0 | 3.25e-01 | 80.6% | 18.5% |
| 5063297 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 45.0 | 3.67e-01 | 90.3% | 38.6% |
| 3511091 | 220.1.1.145 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RASGAP | 0.61 | 44.0 | 3.78e-01 | 83.9% | 55.0% |
| 4917097 | 10.1.1.79 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › RYDR_Jsol | 0.61 | 46.0 | 2.72e-01 | 74.2% | 9.4% |
| 4175293 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 3.36e-01 | 87.1% | 32.9% |
| 3957585 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.59 | 45.0 | 3.36e-01 | 90.3% | 28.4% |
| 3935786 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 3.92e-01 | 100.0% | 58.5% |
| 1181126 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.58 | 45.0 | 2.96e-01 | 96.8% | 18.9% |
| 3244094 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.58 | 43.0 | 4.35e-01 | 77.4% | 96.0% |
| 3816342 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.55 | 41.0 | 4.20e-01 | 83.9% | 90.0% |
| 3671297 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.54 | 40.0 | 2.33e-01 | 100.0% | 23.3% |
| 3618010 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.53 | 43.0 | 3.77e-01 | 96.8% | 58.2% |
| 4961561 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.52 | 40.0 | 2.34e-01 | 100.0% | 22.7% |
| 4032315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.00e-01 | 96.8% | 43.3% |