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MW032452.1__QPD96283.1__X__00188

Bact-Vir

MW032452.1__QPD96283.1__X__00188

Identity

Accession:
MW032452 ↗
Kingdom:
phage

Quality

73.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-98
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04851.22 best ResIII 24.8 2.70e-05 75.3% 39.6%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bvp101 1.10.250.10 Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1 0.62 44.0 4.04e-01 100.0% 56.7%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 44.0 4.64e-01 76.3% 100.0%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 35.0 3.40e-01 72.0% 54.4%
3sqnA02 1.10.1790.40 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › 0.57 46.0 4.24e-01 87.1% 83.1%
1sxjA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 31.0 3.46e-01 93.5% 73.6%
1f2eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 36.0 3.52e-01 71.0% 88.7%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 39.0 3.35e-01 81.7% 80.1%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.50 39.0 3.47e-01 86.0% 62.2%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.50 35.0 3.20e-01 72.0% 77.4%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083896 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.85 61.0 5.02e-01 84.9% 44.5%
3832427 2004.1.1.529 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 0.83 66.0 4.67e-01 84.9% 30.6%
3419308 2004.1.1.529 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 0.80 66.0 4.95e-01 88.2% 38.6%
3193974 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.77 69.0 5.67e-01 96.8% 60.0%
None 0.62 45.0 3.95e-01 77.4% 50.0%
1904338 612.1.1.4 alpha arrays › Retroviral matrix proteins › Retroviral matrix proteins › Retroviral matrix proteins › Gag_p10 0.58 43.0 4.37e-01 78.5% 98.9%
3757390 604.5.1.31 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TRAM_LAG1_CLN8 0.58 44.0 3.25e-01 81.7% 64.2%
4033673 829.1.1.2 a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 0.55 33.0 3.46e-01 90.3% 63.5%
3226591 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.54 35.0 3.06e-01 73.1% 42.9%
3986518 604.12.1.14 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MASE1 0.54 45.0 3.42e-01 93.5% 87.4%
4333763 7014.1.1.1 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.53 38.0 3.38e-01 73.1% 53.8%
5053050 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 39.0 3.71e-01 79.6% 94.5%
3174368 101.1.1.122 alpha arrays › HTH › HTH › Three-helical HTH › DUP 0.51 35.0 3.25e-01 73.1% 99.2%