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MW032452.1__QPD96309.1__X__00157

Bact-Vir

MW032452.1__QPD96309.1__X__00157

Identity

Accession:
MW032452 ↗
Kingdom:
phage

Quality

60.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-68
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.73 59.0 4.83e-01 100.0% 47.6%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.70 61.0 5.75e-01 100.0% 93.8%
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 51.0 4.11e-01 77.3% 82.9%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 52.0 3.29e-01 81.8% 96.8%
3q6kA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 51.0 3.10e-01 78.8% 27.1%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.67 49.0 4.59e-01 78.8% 96.4%
4upkA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.66 54.0 3.26e-01 90.9% 97.6%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.65 58.0 5.03e-01 100.0% 77.2%
2z15A00 3.90.640.90 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain 0.65 48.0 4.05e-01 80.3% 73.1%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.65 49.0 2.90e-01 81.8% 19.9%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.63 47.0 3.68e-01 81.8% 73.2%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.62 47.0 4.38e-01 81.8% 91.7%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 53.0 4.82e-01 98.5% 78.3%
3b5qA00 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.62 53.0 3.20e-01 95.5% 95.0%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.62 46.0 2.94e-01 80.3% 31.6%
1st8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.61 54.0 3.91e-01 100.0% 84.7%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.60 54.0 4.52e-01 100.0% 74.1%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.60 53.0 4.32e-01 100.0% 68.0%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.59 51.0 3.81e-01 98.5% 68.8%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 46.0 2.95e-01 84.8% 26.9%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.59 44.0 4.57e-01 78.8% 88.5%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 51.0 4.53e-01 97.0% 71.3%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.58 52.0 3.91e-01 100.0% 76.5%
3ugfB02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.58 51.0 3.80e-01 100.0% 83.6%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.58 49.0 3.83e-01 97.0% 76.0%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 50.0 3.18e-01 97.0% 40.9%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 43.0 3.93e-01 80.3% 78.4%
6nu8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.57 51.0 3.99e-01 100.0% 62.2%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 51.0 4.16e-01 100.0% 61.8%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 42.0 3.84e-01 80.3% 76.3%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 49.0 3.19e-01 100.0% 51.4%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 2.92e-01 89.4% 94.5%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 50.0 4.32e-01 100.0% 71.2%
3oa4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 41.0 3.32e-01 78.8% 65.4%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 48.0 4.14e-01 100.0% 97.2%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 49.0 3.65e-01 100.0% 79.5%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 44.0 3.22e-01 89.4% 87.4%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 41.0 2.73e-01 84.8% 24.7%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 3.05e-01 97.0% 86.3%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 41.0 4.01e-01 83.3% 90.5%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 38.0 4.13e-01 90.9% 94.2%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 3.07e-01 100.0% 94.0%
4j0wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.76e-01 90.9% 23.5%
8hmcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.00e-01 100.0% 86.7%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.96e-01 100.0% 88.2%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.53 40.0 3.12e-01 84.8% 89.9%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.53e-01 81.8% 26.5%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.55e-01 87.9% 78.0%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4527067 206.1.3.40 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD 0.81 74.0 4.88e-01 100.0% 27.1%
3989333 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.77 49.0 5.17e-01 80.3% 71.7%
4971601 241.14.1.0 a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C 0.74 66.0 6.48e-01 98.5% 91.4%
4309285 3844.2.1.2 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 0.74 65.0 4.72e-01 100.0% 42.7%
3996624 5.1.5.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.72 48.0 2.94e-01 80.3% 12.3%
3468148 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.71 64.0 4.51e-01 98.5% 39.0%
3925754 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.71 50.0 3.98e-01 80.3% 36.3%
3999169 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.71 53.0 3.30e-01 78.8% 22.7%
3929729 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.70 50.0 3.59e-01 81.8% 25.6%
4940356 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.70 52.0 3.79e-01 80.3% 30.0%
3238801 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.70 59.0 3.58e-01 93.9% 14.9%
3561513 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.69 51.0 3.13e-01 78.8% 19.8%
3239485 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 58.0 4.68e-01 93.9% 49.2%
3440332 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 50.0 3.06e-01 78.8% 28.2%
4961399 7515.1.1.2 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.67 53.0 3.21e-01 86.4% 89.4%
3314854 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.67 50.0 3.03e-01 78.8% 27.5%
5023740 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.98e-01 84.8% 92.0%
4478971 4.1.1.174 beta barrels › SH3 › SH3 › SH3 › DUF951 0.66 53.0 5.37e-01 98.5% 89.2%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 51.0 3.41e-01 92.4% 21.6%
4530314 375.13.1.0 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain 0.65 46.0 4.87e-01 77.3% 86.2%
5009939 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 48.0 4.19e-01 81.8% 73.3%
3212404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 49.0 3.34e-01 98.5% 22.0%
5083781 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 57.0 4.20e-01 100.0% 73.5%
3228995 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.63 54.0 3.18e-01 98.5% 11.6%
3243587 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.63 53.0 3.40e-01 93.9% 21.6%
3988075 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 47.0 2.95e-01 80.3% 35.4%
3591792 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.75e-01 81.8% 99.3%
3740622 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.63 47.0 2.95e-01 80.3% 15.7%
3220002 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.62 50.0 3.39e-01 98.5% 23.1%
3920678 5.1.5.41 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 0.62 50.0 3.12e-01 87.9% 46.9%
3465348 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 46.0 3.07e-01 80.3% 26.4%
3290662 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.61 48.0 3.94e-01 93.9% 45.4%
4427264 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.61 45.0 2.77e-01 81.8% 17.1%
4129704 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.61 54.0 4.24e-01 100.0% 77.0%
3621466 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.61 52.0 3.28e-01 98.5% 52.0%
3860723 633.23.1.33 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin, GSG-1 0.60 43.0 3.04e-01 75.8% 60.5%
3839277 241.16.1.1 a+b two layers › Type III secretory system chaperone-like › protein CagD › protein CagD › CagD 0.59 52.0 4.07e-01 100.0% 73.1%
140636 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.59 49.0 3.03e-01 89.4% 94.5%
3222321 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.59 48.0 3.29e-01 97.0% 23.9%
4032117 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.59 52.0 4.03e-01 100.0% 92.7%
3401066 5.1.3.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP 0.59 45.0 2.79e-01 84.8% 38.5%
3764969 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 43.0 3.72e-01 78.8% 76.0%
3937137 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.58 51.0 3.26e-01 97.0% 89.7%
3519579 295.1.1.20 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 0.58 50.0 4.77e-01 98.5% 81.2%
5002449 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.29e-01 89.4% 89.1%
3917877 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.57 44.0 3.11e-01 83.3% 47.0%
3888662 5.1.4.546 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CFAP43_N 0.57 47.0 3.02e-01 95.5% 52.7%
5036669 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 50.0 4.33e-01 98.5% 72.0%
3464671 4.1.1.136 beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.56 43.0 4.31e-01 84.8% 82.9%
4023269 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 46.0 4.03e-01 97.0% 88.2%
3753034 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 48.0 2.98e-01 97.0% 92.3%
3560713 5.1.4.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.56 49.0 2.93e-01 97.0% 89.4%
3613795 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 2.89e-01 100.0% 66.2%
3487549 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 45.0 2.56e-01 95.5% 21.4%
3483289 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.25e-01 84.8% 89.2%
5014688 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 37.0 4.00e-01 81.8% 90.9%
2028019 4.1.1.136 beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.52 42.0 4.21e-01 86.4% 89.4%
3260659 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 43.0 2.76e-01 100.0% 49.0%
3972677 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 39.0 2.63e-01 81.8% 80.4%
3621077 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 39.0 2.62e-01 84.8% 29.8%
3927304 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.72e-01 100.0% 81.1%
D2 medium residues 90-131
PDB