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MW032452.1__QPD96329.1__X__00085

Bact-Vir

MW032452.1__QPD96329.1__X__00085

Identity

Accession:
MW032452 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Henuseptimavirus› Enterobacter_phage_N5822

TaxID: 2777323

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-54
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.62 46.0 3.77e-01 98.0% 42.0%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 45.0 3.65e-01 94.1% 42.3%
1zboA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.59 49.0 3.90e-01 98.0% 49.6%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 36.0 2.94e-01 100.0% 31.7%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 40.0 4.09e-01 98.0% 89.1%
3c19A02 3.10.20.300 Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain 0.55 36.0 3.22e-01 98.0% 43.6%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.54 36.0 2.80e-01 70.6% 46.2%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.54 44.0 3.32e-01 100.0% 44.2%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 34.0 2.40e-01 100.0% 15.8%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 40.0 3.08e-01 100.0% 36.8%
3lidA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 39.0 3.01e-01 100.0% 33.6%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 36.0 2.55e-01 98.0% 22.3%
1xqbA01 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.50 40.0 3.29e-01 96.1% 45.0%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 35.0 3.31e-01 76.5% 64.7%
3c8iA00 2.40.410.10 Mainly Beta › Beta Barrel › putative membrane protein from Corynebacterium diphtheriae fold › putative membrane protein from Corynebacterium diphtheriae superfamily 0.50 42.0 3.26e-01 100.0% 66.1%
5fcrC02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 39.0 3.33e-01 100.0% 48.6%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 3.30e-01 100.0% 48.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3504737 1.1.13.54 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L 0.81 70.0 5.10e-01 98.0% 40.0%
3646145 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.73 57.0 3.34e-01 100.0% 10.9%
4849375 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 58.0 5.74e-01 100.0% 83.3%
3715054 206.1.1.78 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kinase-like 0.69 53.0 3.20e-01 100.0% 12.1%
3517676 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 58.0 4.41e-01 100.0% 51.7%
3641544 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.62 42.0 4.50e-01 98.0% 90.0%
3743499 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 49.0 2.96e-01 100.0% 32.5%
4945313 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.48e-01 94.1% 38.4%
3893575 11.1.1.860 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CLSTN_C 0.54 44.0 3.19e-01 98.0% 36.4%
3469957 11.1.1.419 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3694 0.53 40.0 2.74e-01 86.3% 62.3%
4961740 375.1.1.350 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26413 0.53 35.0 3.39e-01 90.2% 58.3%
3923839 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 36.0 3.34e-01 90.2% 54.3%
4149046 243.3.1.60 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5385 0.52 41.0 3.52e-01 98.0% 52.2%
3306580 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 31.0 2.98e-01 96.1% 45.0%
4317417 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.52 42.0 2.71e-01 100.0% 29.3%
3472375 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 43.0 3.60e-01 98.0% 68.9%
D2 medium residues 57-138
PDB
Domain cluster: rep: OQ436456.1__WEU67278.1__X__00011__D227-304
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05100.18 best Phage_tail_L 77.8 1.00e-21 95.1% 35.9%