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MW042812.1__QOV07704.1__MHDALJEF_00245__00049
Bact-VirMW042812.1__QOV07704.1__MHDALJEF_00245__00049
Identity
- Accession:
- MW042812 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Przondovirus›
Klebsiella_phage_066134
TaxID: 2777407
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-65
Domain cluster:
rep: IMGVR_UViG_3300026261_000079-3300026261-Ga0208524_10053942__D83-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05396.17 best | Phage_T7_Capsid | 69.1 | 9.60e-19 | 100.0% | 35.1% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.74 | 49.0 | 3.78e-01 | 100.0% | 31.7% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.74 | 44.0 | 3.51e-01 | 100.0% | 31.2% |
| 3f2bA07 | 6.10.140.1510 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 54.0 | 4.97e-01 | 87.7% | 65.1% |
| 2prrA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.65 | 58.0 | 4.64e-01 | 100.0% | 83.5% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 44.0 | 4.79e-01 | 96.9% | 87.0% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 50.0 | 4.97e-01 | 96.9% | 80.9% |
| 1o7dC01 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.63 | 39.0 | 4.01e-01 | 78.5% | 65.6% |
| 2yk0A03 | 1.20.58.1930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 50.0 | 3.48e-01 | 89.2% | 70.5% |
| 2lf3A00 | 1.20.1280.220 | Mainly Alpha › Up-down Bundle › Monooxygenase › Effector protein HopAB, BAK1-interacting domain | 0.61 | 47.0 | 4.04e-01 | 84.6% | 56.2% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 4.31e-01 | 72.3% | 77.8% |
| 4ex8A00 | 3.40.1790.10 | Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain | 0.55 | 50.0 | 3.18e-01 | 100.0% | 35.2% |
| 1q08A00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 44.0 | 3.88e-01 | 86.2% | 59.6% |
| 3dptB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.82e-01 | 87.7% | 75.4% |
| 3b1fA02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.53 | 46.0 | 3.89e-01 | 100.0% | 71.2% |
| 2f1kC02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.52 | 42.0 | 3.64e-01 | 95.4% | 77.0% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.51 | 36.0 | 3.76e-01 | 78.5% | 83.3% |
| 3ktdD02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.50 | 44.0 | 3.74e-01 | 100.0% | 69.7% |
| 3q23A04 | 6.10.140.1370 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 38.0 | 3.47e-01 | 87.7% | 60.4% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3873950 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.68 | 55.0 | 4.77e-01 | 100.0% | 57.0% |
| 3582723 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.68 | 54.0 | 5.34e-01 | 100.0% | 81.4% |
| 3853109 | 5001.1.1.138 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › PF30689 | 0.65 | 51.0 | 3.22e-01 | 84.6% | 42.2% |
| 4275568 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.62 | 48.0 | 4.74e-01 | 98.5% | 80.0% |
| 3454275 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.61 | 42.0 | 4.70e-01 | 86.2% | 96.0% |
| 3231816 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 42.0 | 4.37e-01 | 87.7% | 80.0% |
| 2708 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.60 | 44.0 | 3.27e-01 | 89.2% | 30.2% |
| 3238365 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.59 | 53.0 | 3.08e-01 | 100.0% | 18.3% |
| 4957951 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.58 | 40.0 | 4.02e-01 | 72.3% | 70.8% |
| 1885514 | 3972.1.1.1 ↗ | alpha bundles › Amylase-binding protein AbpA › Amylase-binding protein AbpA › Amylase-binding protein AbpA › AbpA-like | 0.58 | 39.0 | 2.91e-01 | 70.8% | 31.8% |
| 3798353 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.57 | 49.0 | 3.83e-01 | 100.0% | 92.7% |
| 5075035 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 41.0 | 2.64e-01 | 73.8% | 27.6% |
| 4647835 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.57 | 50.0 | 3.44e-01 | 100.0% | 86.1% |
| 5083776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 42.0 | 3.73e-01 | 78.5% | 85.3% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 42.0 | 4.22e-01 | 98.5% | 84.6% |
| 3816200 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 41.0 | 3.58e-01 | 81.5% | 54.3% |
| 3524358 | 2006.1.4.48 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DC_STAMP | 0.55 | 46.0 | 3.92e-01 | 92.3% | 72.4% |
| 3600731 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.55 | 49.0 | 4.04e-01 | 100.0% | 84.3% |
| 4097875 | 3712.1.1.2 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › DUF412 | 0.54 | 39.0 | 3.36e-01 | 100.0% | 50.0% |
| 4951522 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.53 | 42.0 | 3.04e-01 | 95.4% | 58.3% |
| 3586355 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 47.0 | 2.95e-01 | 100.0% | 24.8% |
| 4959775 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.51 | 43.0 | 2.81e-01 | 98.5% | 68.3% |
| 4463728 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.51 | 41.0 | 2.59e-01 | 100.0% | 18.2% |
| 3748412 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.50 | 44.0 | 3.60e-01 | 95.4% | 92.2% |