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MW043865.1__QPI17661.1__vBAmePR8F_gp01__00001

Bact-Vir

MW043865.1__QPI17661.1__vBAmePR8F_gp01__00001

Identity

Accession:
MW043865 ↗
Kingdom:
phage

Quality

74.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Foturvirus› Alteromonas_phage_vB_AmeP_R8W

TaxID: 2774152

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-109
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 47.0 5.07e-01 89.7% 77.6%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 40.0 4.53e-01 80.4% 80.0%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.56 40.0 3.71e-01 75.3% 75.4%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 37.0 3.47e-01 70.1% 86.6%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.24e-01 95.9% 87.8%
2cnxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 48.0 3.37e-01 100.0% 52.9%
3eweA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 47.0 3.51e-01 100.0% 64.7%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 40.0 3.10e-01 83.5% 37.6%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 37.0 3.37e-01 85.6% 54.0%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 37.0 3.45e-01 88.7% 59.3%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 3.12e-01 97.9% 31.5%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 37.0 3.49e-01 75.3% 74.8%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 39.0 3.62e-01 88.7% 62.4%
2kk4A00 3.10.20.840 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 36.0 3.69e-01 100.0% 76.8%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998870 4.1.1.483 ↗ beta barrels › SH3 › SH3 › SH3 › RRXRR 0.85 42.0 4.50e-01 96.9% 56.5%
2106277 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.70 47.0 4.29e-01 89.7% 53.2%
4261791 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.70 48.0 4.15e-01 89.7% 47.6%
3258767 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.69 48.0 4.08e-01 89.7% 46.0%
3778257 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.68 47.0 4.13e-01 89.7% 49.3%
3172580 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 54.0 3.55e-01 97.9% 21.5%
3924038 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.90e-01 80.4% 97.3%
4278661 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.56 39.0 3.03e-01 79.4% 32.9%
3934570 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 49.0 3.34e-01 100.0% 63.7%
3837325 5.1.4.261 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, EIF3I 0.55 50.0 3.40e-01 100.0% 53.7%
3272453 6.1.1.7 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA 0.53 42.0 3.82e-01 85.6% 67.4%
1146672 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.53 41.0 3.92e-01 95.9% 71.2%
3830081 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.53 48.0 3.32e-01 100.0% 45.5%
143784 6.1.1.19 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › RicinB_lectin_2 0.53 37.0 3.35e-01 73.2% 55.0%
3722546 5.1.4.379 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 0.53 47.0 3.20e-01 100.0% 60.5%
3578425 5.1.4.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.53 48.0 3.17e-01 100.0% 56.6%
None — 0.52 46.0 3.27e-01 100.0% 40.6%
3217145 5.1.4.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.52 46.0 3.19e-01 100.0% 49.3%
3601400 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 46.0 3.00e-01 100.0% 50.9%
3586726 5.1.4.421 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.52 45.0 3.17e-01 97.9% 31.2%
3229399 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 45.0 3.14e-01 100.0% 38.8%
3517217 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 45.0 3.02e-01 97.9% 42.1%
3442715 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.50 44.0 3.15e-01 100.0% 69.5%
D2 high residues 141-198
PDB