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MW055913.1__QPX62557.1__SEA_WOLLYPOG_4__00004
Bact-VirMW055913.1__QPX62557.1__SEA_WOLLYPOG_4__00004
Identity
- Accession:
- MW055913 ↗
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Taxonomy
TaxID: 2790985
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 60-119
Domain cluster:
representative
D2
medium
residues 120-200
Domain cluster:
rep: MH884509.1__AYP68439.1__BboS125_00070__00069__D112-199
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.66 | 38.0 | 3.60e-01 | 80.2% | 48.4% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.64 | 52.0 | 3.83e-01 | 92.6% | 59.7% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 38.0 | 3.67e-01 | 100.0% | 53.2% |
| 1nu7D02 | 1.20.120.760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle, domain 2 | 0.61 | 51.0 | 4.46e-01 | 95.1% | 95.3% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 3.68e-01 | 77.8% | 48.0% |
| 1n83A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.60 | 52.0 | 3.71e-01 | 98.8% | 52.6% |
| 1d8cA03 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.59 | 48.0 | 4.11e-01 | 90.1% | 100.0% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 42.0 | 3.52e-01 | 75.3% | 82.1% |
| 3dydA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 48.0 | 4.03e-01 | 90.1% | 79.6% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 38.0 | 4.07e-01 | 74.1% | 82.1% |
| 1q5qH00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 42.0 | 3.08e-01 | 77.8% | 79.9% |
| 7pi0S01 | 1.10.3460.10 | Mainly Alpha › Orthogonal Bundle › Chlorophyll a-b binding protein › Chlorophyll a/b binding protein domain | 0.57 | 42.0 | 3.24e-01 | 88.9% | 34.0% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.57 | 37.0 | 3.32e-01 | 74.1% | 44.6% |
| 1u6gC00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 34.0 | 1.90e-01 | 70.4% | 4.4% |
| 2f2cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 43.0 | 3.92e-01 | 85.2% | 60.6% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.56 | 41.0 | 3.50e-01 | 76.5% | 54.8% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 3.09e-01 | 70.4% | 59.4% |
| 4hy1A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.53 | 44.0 | 3.63e-01 | 93.8% | 66.5% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.53 | 41.0 | 3.78e-01 | 85.2% | 100.0% |
| 7yx8A01 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.53 | 37.0 | 3.00e-01 | 75.3% | 98.8% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.52 | 30.0 | 3.16e-01 | 76.5% | 62.0% |
| 5kd5A01 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.52 | 42.0 | 3.28e-01 | 88.9% | 97.8% |
| 3qbmB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 45.0 | 3.45e-01 | 100.0% | 76.1% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.51 | 29.0 | 3.25e-01 | 71.6% | 74.1% |
| 3bzcA02 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.50 | 44.0 | 3.04e-01 | 95.1% | 30.4% |
| 5ly3A02 | 3.30.420.570 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.50 | 40.0 | 3.03e-01 | 96.3% | 33.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974474 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 38.0 | 3.70e-01 | 100.0% | 46.7% |
| 3788706 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.63 | 34.0 | 1.95e-01 | 71.6% | 6.9% |
| 3722527 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.61 | 49.0 | 3.48e-01 | 88.9% | 52.5% |
| 3985490 | 192.2.1.5 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 | 0.60 | 42.0 | 3.59e-01 | 71.6% | 100.0% |
| 3648830 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 45.0 | 4.48e-01 | 82.7% | 84.7% |
| 3271850 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.60 | 41.0 | 2.66e-01 | 71.6% | 52.3% |
| 4269513 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.59 | 44.0 | 3.23e-01 | 81.5% | 80.9% |
| 4054263 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 48.0 | 3.52e-01 | 92.6% | 65.0% |
| 3466259 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.59 | 45.0 | 2.91e-01 | 86.4% | 18.1% |
| 4410759 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 41.0 | 3.62e-01 | 98.8% | 51.3% |
| 3939641 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.57 | 42.0 | 3.10e-01 | 79.0% | 66.8% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 41.0 | 3.95e-01 | 98.8% | 67.8% |
| 4941110 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 48.0 | 3.41e-01 | 98.8% | 82.9% |
| 4890753 | 4342.1.1.2 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like › YqgF | 0.56 | 47.0 | 3.49e-01 | 91.4% | 39.3% |
| 3970671 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 38.0 | 3.98e-01 | 70.4% | 85.3% |
| 3696633 | 3393.1.1.2 ↗ | extended segments › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › Kinesin_assoc | 0.55 | 35.0 | 3.38e-01 | 80.2% | 55.8% |
| 3698817 | 1016.1.1.1 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK | 0.55 | 37.0 | 3.40e-01 | 70.4% | 59.1% |
| 3696592 | 2484.1.1.220 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27033 | 0.54 | 44.0 | 3.29e-01 | 92.6% | 48.0% |
| 3916783 | 304.27.1.0 ↗ | a+b two layers › Alpha-beta plaits › Formiminotransferase domain of formiminotransferase-cyclodeaminase. › Formiminotransferase domain of formiminotransferase-cyclodeaminase. | 0.53 | 40.0 | 3.55e-01 | 80.2% | 82.5% |
| 4991462 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.53 | 30.0 | 3.15e-01 | 82.7% | 57.3% |
| 3599123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 44.0 | 3.04e-01 | 98.8% | 43.4% |
| 4935614 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.53 | 40.0 | 3.04e-01 | 90.1% | 33.5% |
| 3277822 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.52 | 38.0 | 3.18e-01 | 79.0% | 57.9% |
| 4937551 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.52 | 41.0 | 3.05e-01 | 85.2% | 60.0% |
| 2773193 | 2002.1.1.173 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH123_cat | 0.51 | 42.0 | 2.73e-01 | 93.8% | 77.4% |
| 4011979 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.60e-01 | 87.7% | 87.2% |
| 4929567 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.51 | 38.0 | 3.14e-01 | 79.0% | 60.0% |
| 4470290 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.51 | 46.0 | 2.85e-01 | 98.8% | 27.1% |
| 3386423 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.50 | 42.0 | 3.45e-01 | 88.9% | 85.7% |
| 5057974 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.50 | 39.0 | 3.52e-01 | 98.8% | 60.0% |