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MW057855.1__QPB11985.1__X__00022
Bact-VirMW057855.1__QPB11985.1__X__00022
Identity
- Accession:
- MW057855 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-49
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.65 | 50.0 | 3.73e-01 | 100.0% | 31.4% |
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.65 | 52.0 | 3.80e-01 | 100.0% | 30.8% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.63 | 50.0 | 4.10e-01 | 100.0% | 45.9% |
| 3qaoA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.60 | 46.0 | 3.43e-01 | 100.0% | 33.6% |
| 2qxfA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 44.0 | 3.07e-01 | 97.6% | 30.7% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.59 | 47.0 | 4.37e-01 | 100.0% | 81.0% |
| 1bhdA00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.58 | 46.0 | 3.58e-01 | 100.0% | 69.4% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.57 | 45.0 | 4.05e-01 | 100.0% | 71.6% |
| 4gyiA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 3.65e-01 | 95.1% | 72.0% |
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.56 | 42.0 | 3.34e-01 | 100.0% | 37.4% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.56 | 41.0 | 2.72e-01 | 80.5% | 32.2% |
| 6h1wA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 42.0 | 3.18e-01 | 92.7% | 90.6% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.54 | 44.0 | 3.43e-01 | 100.0% | 69.4% |
| 2ef7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 44.0 | 3.15e-01 | 92.7% | 97.6% |
| 2wteA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.64e-01 | 92.7% | 80.6% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 41.0 | 3.69e-01 | 100.0% | 67.1% |
| 3ddjA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 41.0 | 2.96e-01 | 95.1% | 92.3% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.38e-01 | 100.0% | 69.8% |
| 1hdiA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.52 | 41.0 | 2.77e-01 | 95.1% | 39.5% |
| 2yzqA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 40.0 | 3.21e-01 | 95.1% | 100.0% |
| 6tuaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 42.0 | 2.80e-01 | 100.0% | 36.1% |
| 1ffvB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.50 | 37.0 | 2.42e-01 | 80.5% | 43.9% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.50 | 38.0 | 3.09e-01 | 100.0% | 40.7% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.50 | 43.0 | 3.42e-01 | 100.0% | 53.9% |
| 2gaxA00 | 3.40.1490.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 | 0.50 | 34.0 | 2.52e-01 | 75.6% | 23.9% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941467 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.70 | 56.0 | 4.64e-01 | 100.0% | 48.8% |
| 3970754 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 55.0 | 4.55e-01 | 100.0% | 48.8% |
| 4197446 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 53.0 | 3.87e-01 | 100.0% | 29.6% |
| 4672676 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 54.0 | 3.85e-01 | 100.0% | 28.6% |
| 4932995 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.66 | 48.0 | 4.63e-01 | 100.0% | 70.0% |
| 3954355 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.66 | 51.0 | 3.93e-01 | 100.0% | 35.5% |
| 3593647 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.66 | 43.0 | 3.27e-01 | 70.7% | 26.7% |
| 3282573 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.66 | 52.0 | 3.85e-01 | 100.0% | 32.0% |
| 3980766 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 53.0 | 4.02e-01 | 100.0% | 60.9% |
| 2527708 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.64 | 53.0 | 3.71e-01 | 100.0% | 28.0% |
| 3479068 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 52.0 | 4.39e-01 | 100.0% | 63.7% |
| 4470278 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.64 | 49.0 | 3.76e-01 | 100.0% | 33.9% |
| 4488952 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.64 | 52.0 | 3.98e-01 | 100.0% | 60.9% |
| 3589820 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.64 | 50.0 | 3.73e-01 | 100.0% | 32.0% |
| 3281871 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.63 | 48.0 | 3.73e-01 | 100.0% | 54.2% |
| 3282255 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.63 | 49.0 | 3.80e-01 | 100.0% | 36.1% |
| 4943408 | 7569.1.1.1 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG | 0.63 | 49.0 | 3.24e-01 | 95.1% | 36.0% |
| 3281073 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.63 | 48.0 | 3.71e-01 | 100.0% | 35.2% |
| 4536234 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.63 | 49.0 | 3.79e-01 | 100.0% | 64.3% |
| 4117490 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.63 | 49.0 | 3.58e-01 | 100.0% | 30.0% |
| 4668445 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.63 | 49.0 | 4.59e-01 | 100.0% | 70.9% |
| 4031948 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.63 | 47.0 | 3.60e-01 | 100.0% | 33.0% |
| 3939641 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.63 | 51.0 | 3.23e-01 | 95.1% | 62.1% |
| 4031764 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.62 | 49.0 | 3.56e-01 | 100.0% | 29.0% |
| 4564454 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.62 | 47.0 | 3.75e-01 | 100.0% | 37.1% |
| 2775358 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.62 | 47.0 | 3.70e-01 | 100.0% | 36.4% |
| 3943313 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.61 | 48.0 | 3.65e-01 | 100.0% | 34.8% |
| 3946914 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.60 | 47.0 | 3.42e-01 | 100.0% | 30.0% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.60 | 46.0 | 3.57e-01 | 100.0% | 59.1% |
| 3387245 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.59 | 44.0 | 3.35e-01 | 100.0% | 31.9% |
| 2325046 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.59 | 45.0 | 3.45e-01 | 100.0% | 33.3% |
| 4334333 | 101.1.9.1 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind | 0.58 | 45.0 | 3.33e-01 | 100.0% | 55.7% |
| 4972657 | 5073.1.2.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Copper efflux ATPase transmembrane domain | 0.58 | 46.0 | 3.01e-01 | 100.0% | 25.1% |
| 4962040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 3.28e-01 | 100.0% | 86.4% |
| 3732556 | 376.1.1.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FANCL_C | 0.56 | 42.0 | 3.35e-01 | 82.9% | 91.8% |
| 4015831 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.56 | 46.0 | 4.24e-01 | 100.0% | 89.7% |
| 3979197 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.55 | 42.0 | 2.52e-01 | 100.0% | 10.4% |
| 4005987 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 39.0 | 2.77e-01 | 95.1% | 24.8% |
| 4553926 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.54 | 36.0 | 2.80e-01 | 70.7% | 89.1% |
| 3839711 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.54 | 40.0 | 2.21e-01 | 92.7% | 4.8% |
| 4593684 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.54 | 45.0 | 2.53e-01 | 100.0% | 54.8% |
| 3740018 | 109.21.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nic96 | 0.54 | 40.0 | 2.39e-01 | 97.6% | 17.0% |
| 3725257 | 109.3.1.148 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Goodbye | 0.53 | 42.0 | 2.77e-01 | 100.0% | 18.7% |
| 3538512 | 3892.1.1.0 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II | 0.52 | 40.0 | 2.80e-01 | 92.7% | 75.0% |
| 3930943 | 2004.1.1.33 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind | 0.52 | 43.0 | 2.71e-01 | 95.1% | 17.8% |
| 3583484 | 558.1.1.21 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › BRWD1_N | 0.52 | 38.0 | 2.99e-01 | 78.0% | 56.5% |
| 3648914 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.52 | 32.0 | 3.04e-01 | 90.2% | 50.0% |
| 4963030 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.51 | 40.0 | 3.03e-01 | 95.1% | 82.5% |
| 3434870 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.51 | 43.0 | 3.57e-01 | 100.0% | 88.7% |
| 4936900 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.51 | 42.0 | 2.39e-01 | 100.0% | 9.7% |
| 3296439 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.50 | 38.0 | 3.64e-01 | 100.0% | 70.9% |
| 4622747 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.50 | 37.0 | 2.34e-01 | 97.6% | 11.9% |
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.50 | 39.0 | 2.88e-01 | 100.0% | 49.7% |