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MW057855.1__QPB11986.1__X__00023

Bact-Vir

MW057855.1__QPB11986.1__X__00023

Identity

Accession:
MW057855 ↗
Kingdom:
phage

Quality

93.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Providencia_phage_PSTCR3

TaxID: 2783545

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-101
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.63 35.0 4.49e-01 84.4% 100.0%
1dj8A00 1.10.890.10 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A 0.55 39.0 4.21e-01 97.9% 91.1%
1ichA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.53 39.0 4.09e-01 79.2% 97.7%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 34.0 3.74e-01 96.9% 78.8%
1xqiA00 3.30.70.141 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain 0.51 44.0 3.66e-01 97.9% 91.8%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.51 44.0 3.41e-01 94.8% 50.0%
1ze0A02 1.10.4070.10 Mainly Alpha › Orthogonal Bundle › putative redox-enzyme maturation protein fold › putative redox-enzyme maturation protein domain 0.51 36.0 3.90e-01 72.9% 92.3%
3c2bA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 46.0 3.96e-01 100.0% 83.0%
4k7bA00 1.20.120.1740 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sodium ion translocating NADH-quinone reductase subunit C-like 0.50 36.0 3.51e-01 100.0% 65.8%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.50 42.0 2.83e-01 93.8% 54.5%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4321419 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.64 48.0 4.17e-01 87.5% 52.4%
4936653 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.63 51.0 4.45e-01 87.5% 59.3%
3457360 103.4.1.6 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › EloA-BP1 0.58 39.0 4.04e-01 91.7% 73.3%
4952231 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.57 45.0 3.83e-01 87.5% 49.7%
4967323 4156.1.1.0 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.57 46.0 4.10e-01 87.5% 62.9%
5041503 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.57 44.0 3.85e-01 87.5% 52.9%
3973714 3921.1.1.8 ↗ alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › 7TM_transglut 0.56 41.0 3.40e-01 76.0% 93.3%
3319076 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.54 37.0 3.86e-01 92.7% 75.6%
3871164 108.1.1.120 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › PF27858 0.53 44.0 4.10e-01 92.7% 87.2%
4683095 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.53 35.0 3.76e-01 96.9% 80.0%
5071060 632.15.1.4 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 0.53 34.0 3.48e-01 96.9% 65.3%
4399519 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 41.0 2.63e-01 99.0% 16.5%
4025168 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.52 34.0 3.60e-01 96.9% 72.9%
4655075 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.52 34.0 3.51e-01 96.9% 70.0%
3394510 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.52 34.0 3.71e-01 94.8% 81.2%
4452141 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.52 34.0 3.57e-01 95.8% 74.1%
4479748 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.51 33.0 3.46e-01 95.8% 70.0%