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MW057855.1__QPB11991.1__X__00028
Bact-VirMW057855.1__QPB11991.1__X__00028
Identity
- Accession:
- MW057855 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-53
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.92 | 79.0 | 6.41e-01 | 100.0% | 53.3% |
| 2cwyA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.84 | 70.0 | 5.73e-01 | 100.0% | 51.6% |
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.83 | 71.0 | 6.13e-01 | 100.0% | 62.0% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.81 | 64.0 | 3.83e-01 | 83.0% | 14.6% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.81 | 62.0 | 4.76e-01 | 81.1% | 40.0% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 57.0 | 4.99e-01 | 96.2% | 50.0% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 62.0 | 5.46e-01 | 83.0% | 63.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.79 | 67.0 | 5.28e-01 | 100.0% | 45.9% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.78 | 59.0 | 4.13e-01 | 81.1% | 29.8% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.77 | 70.0 | 5.53e-01 | 100.0% | 56.3% |
| 2yinA01 | 1.25.40.410 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A | 0.76 | 68.0 | 5.08e-01 | 100.0% | 42.2% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.74 | 60.0 | 4.19e-01 | 86.8% | 73.2% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 56.0 | 5.47e-01 | 83.0% | 84.2% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 55.0 | 5.17e-01 | 83.0% | 98.4% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.71 | 54.0 | 4.90e-01 | 83.0% | 61.6% |
| 3oqlC00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.70 | 54.0 | 3.47e-01 | 83.0% | 18.6% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 51.0 | 4.47e-01 | 83.0% | 63.5% |
| 7smtA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.68 | 58.0 | 4.14e-01 | 100.0% | 40.8% |
| 1b8dA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.68 | 57.0 | 4.03e-01 | 94.3% | 69.5% |
| 1wncB00 | 1.20.5.300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 51.0 | 4.44e-01 | 83.0% | 84.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 51.0 | 4.48e-01 | 83.0% | 73.4% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.67 | 58.0 | 4.97e-01 | 100.0% | 75.9% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 57.0 | 4.67e-01 | 100.0% | 85.6% |
| 4dhdA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.66 | 53.0 | 3.30e-01 | 92.5% | 34.8% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.65 | 49.0 | 4.42e-01 | 83.0% | 64.5% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.65 | 54.0 | 4.43e-01 | 100.0% | 82.0% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.65 | 52.0 | 4.53e-01 | 92.5% | 79.3% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.64 | 52.0 | 4.33e-01 | 100.0% | 58.5% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.64 | 57.0 | 4.38e-01 | 100.0% | 76.7% |
| 4gmnA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 55.0 | 3.19e-01 | 100.0% | 18.0% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 51.0 | 4.93e-01 | 100.0% | 87.3% |
| 3ns4A00 | 1.10.357.110 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus | 0.62 | 51.0 | 3.54e-01 | 100.0% | 44.9% |
| 1q5nA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.62 | 45.0 | 3.03e-01 | 83.0% | 23.0% |
| 1v9dB00 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.62 | 51.0 | 3.25e-01 | 100.0% | 51.4% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 44.0 | 3.92e-01 | 79.2% | 57.8% |
| 4cq4B00 | 6.10.340.10 | Special › Helix non-globular › hypothetical protein mp506/mpn330, domain 1 › | 0.61 | 47.0 | 3.81e-01 | 100.0% | 43.1% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.61 | 44.0 | 3.63e-01 | 83.0% | 56.2% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 50.0 | 4.20e-01 | 100.0% | 87.1% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 43.0 | 3.98e-01 | 83.0% | 63.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.60 | 43.0 | 3.07e-01 | 81.1% | 41.5% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.60 | 49.0 | 4.20e-01 | 100.0% | 71.9% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 43.0 | 3.61e-01 | 79.2% | 51.5% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 45.0 | 4.29e-01 | 98.1% | 89.6% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.56 | 40.0 | 3.13e-01 | 81.1% | 41.5% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 43.0 | 3.45e-01 | 100.0% | 39.4% |
| 1z9hA03 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 43.0 | 3.25e-01 | 100.0% | 76.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 54369 | 4266.2.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like | 0.84 | 70.0 | 5.74e-01 | 100.0% | 51.1% |
| 3589400 | 192.5.1.4 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF1140 | 0.79 | 62.0 | 4.92e-01 | 83.0% | 46.0% |
| 3384661 | 601.1.2.90 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Not3 | 0.79 | 61.0 | 4.52e-01 | 83.0% | 35.4% |
| 3319168 | 3922.1.1.163 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Not3 | 0.79 | 60.0 | 4.51e-01 | 83.0% | 35.4% |
| 3884660 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 69.0 | 4.34e-01 | 98.1% | 20.4% |
| 4174713 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.78 | 60.0 | 5.20e-01 | 83.0% | 75.0% |
| 3839778 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 57.0 | 5.49e-01 | 79.2% | 98.3% |
| 3834131 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.77 | 58.0 | 4.32e-01 | 83.0% | 94.8% |
| 3809170 | 3826.1.1.92 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › WAV3_C | 0.77 | 67.0 | 5.99e-01 | 100.0% | 73.3% |
| 5048041 | 610.2.1.0 ↗ | alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 | 0.74 | 64.0 | 5.32e-01 | 100.0% | 64.2% |
| 2773737 | 3892.1.1.2 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II › PNTB_4TM | 0.73 | 53.0 | 3.55e-01 | 83.0% | 21.4% |
| 3192973 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 61.0 | 3.98e-01 | 100.0% | 22.7% |
| 4022256 | 109.7.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › PF28749 | 0.71 | 61.0 | 5.39e-01 | 100.0% | 67.5% |
| 7636 | 4053.1.1.1 ↗ | a+b complex topology › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Ter | 0.69 | 54.0 | 5.13e-01 | 84.9% | 74.2% |
| 3583783 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.69 | 59.0 | 4.60e-01 | 100.0% | 83.3% |
| 3190136 | 109.4.1.570 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps8 | 0.67 | 58.0 | 4.12e-01 | 100.0% | 36.5% |
| 3721653 | 109.12.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › Vps8 | 0.67 | 57.0 | 4.11e-01 | 100.0% | 37.6% |
| 3453715 | 603.1.1.118 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF7610 | 0.67 | 55.0 | 4.78e-01 | 100.0% | 82.2% |
| 4937093 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 48.0 | 3.82e-01 | 83.0% | 83.3% |
| 3531746 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.65 | 53.0 | 4.42e-01 | 100.0% | 84.8% |
| 3940791 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 55.0 | 4.57e-01 | 100.0% | 85.0% |
| 3330717 | 604.12.1.99 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF3741 | 0.64 | 49.0 | 4.88e-01 | 84.9% | 81.8% |
| 3470544 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.64 | 55.0 | 4.61e-01 | 100.0% | 88.4% |
| 3327042 | 616.1.1.37 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF3741 | 0.63 | 48.0 | 4.79e-01 | 83.0% | 80.0% |
| 3382576 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.62 | 49.0 | 4.11e-01 | 94.3% | 65.7% |
| 3935032 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.62 | 50.0 | 4.20e-01 | 100.0% | 84.8% |
| 3958744 | 604.24.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C | 0.61 | 51.0 | 4.29e-01 | 100.0% | 92.0% |
| 3808 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.61 | 50.0 | 4.14e-01 | 100.0% | 83.0% |
| 4613904 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.60 | 43.0 | 4.18e-01 | 100.0% | 70.0% |
| 4121471 | 3236.1.1.12 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Cons_hypoth698 | 0.57 | 42.0 | 2.64e-01 | 83.0% | 41.3% |
| 3931733 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 41.0 | 3.56e-01 | 79.2% | 97.6% |