Back to structures

MW057855.1__QPB12008.1__X__00045

Bact-Vir

MW057855.1__QPB12008.1__X__00045

Identity

Accession:
MW057855 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-122
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 34.0 4.07e-01 74.7% 78.8%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 35.0 3.65e-01 74.7% 58.5%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.57 42.0 3.49e-01 76.8% 76.9%
2bszA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.56 42.0 3.50e-01 77.8% 77.6%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 42.0 3.44e-01 80.8% 74.5%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.55 38.0 3.83e-01 70.7% 87.0%
4guzA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.55 40.0 3.31e-01 76.8% 71.8%
1w4tA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.54 40.0 3.29e-01 77.8% 78.1%
1xeaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 41.0 3.27e-01 80.8% 69.3%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 39.0 2.77e-01 79.8% 62.3%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 34.0 3.49e-01 74.7% 65.7%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.51 40.0 2.88e-01 85.9% 62.5%
6o15A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 38.0 2.84e-01 78.8% 77.3%
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.50 40.0 2.98e-01 85.9% 61.9%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3909523 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.65 48.0 3.78e-01 78.8% 72.2%
3534783 11.1.1.787 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITI_HC_C 0.63 48.0 3.55e-01 79.8% 71.8%
2123017 295.1.1.10 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PnpCD_PnpD_N 0.63 47.0 4.06e-01 80.8% 91.3%
4946049 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.61 45.0 4.98e-01 76.8% 100.0%
3994162 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.57 41.0 3.40e-01 74.7% 93.7%
4234211 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.57 37.0 4.02e-01 70.7% 77.6%
4668932 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.57 41.0 3.03e-01 74.7% 91.6%
5042309 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.55 30.0 3.11e-01 85.9% 54.4%
4032324 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.55 40.0 2.97e-01 75.8% 88.5%
3963175 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.55 39.0 3.14e-01 72.7% 55.7%
4301684 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.54 44.0 3.63e-01 87.9% 72.7%
3547186 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 40.0 3.72e-01 77.8% 77.6%
5005890 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 41.0 3.34e-01 79.8% 50.9%
3388090 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.53 46.0 3.24e-01 94.9% 41.6%
4487335 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.53 42.0 3.09e-01 85.9% 60.0%
3600254 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 37.0 2.97e-01 71.7% 72.4%
3193833 298.1.1.8 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.52 40.0 2.70e-01 79.8% 77.6%
3697914 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.52 38.0 2.60e-01 76.8% 81.8%
3788776 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.52 43.0 3.01e-01 90.9% 43.3%
3225640 220.1.1.168 beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.52 46.0 4.32e-01 100.0% 88.0%
4408605 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.51 39.0 3.22e-01 79.8% 49.4%
4352331 101.1.2.788 alpha arrays › HTH › HTH › winged helix domain › PF29760 0.51 31.0 3.28e-01 87.9% 66.7%
None 0.51 39.0 2.77e-01 78.8% 80.7%
3568386 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 39.0 2.84e-01 79.8% 71.3%
4610518 5.1.5.201 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF30361 0.51 44.0 2.98e-01 94.9% 41.3%
3222575 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 37.0 2.81e-01 77.8% 35.9%
4411707 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 39.0 2.80e-01 80.8% 74.5%
3739320 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 42.0 3.30e-01 89.9% 59.5%
4952106 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 35.0 2.95e-01 72.7% 86.7%
154893 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.50 42.0 3.06e-01 90.9% 61.2%
142171 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.50 40.0 2.98e-01 85.9% 61.9%
3700695 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.50 43.0 2.98e-01 94.9% 38.0%
3615220 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.50 35.0 2.94e-01 73.7% 64.6%