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MW057858.1__QPB12297.1__X__00047
Bact-VirMW057858.1__QPB12297.1__X__00047
Identity
- Accession:
- MW057858 ↗
- Kingdom:
- phage
Quality
90.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Providencia_phage_PSTCR6
TaxID: 2783548
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54
Domain cluster:
rep: HQ615693.1__AEC53196.1__SCRM01_250__00250__D4-55
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 71.0 | 6.61e-01 | 94.3% | 98.5% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 68.0 | 6.42e-01 | 92.5% | 100.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 65.0 | 6.17e-01 | 90.6% | 100.0% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 56.0 | 5.45e-01 | 88.7% | 100.0% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.73 | 63.0 | 3.91e-01 | 100.0% | 52.2% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 5.31e-01 | 92.5% | 93.3% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 5.17e-01 | 94.3% | 97.1% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 5.28e-01 | 94.3% | 96.9% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.68 | 59.0 | 4.16e-01 | 100.0% | 57.3% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 4.93e-01 | 88.7% | 88.3% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 52.0 | 4.17e-01 | 100.0% | 53.6% |
| 1h8uB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.61 | 52.0 | 4.14e-01 | 100.0% | 93.1% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 3.92e-01 | 83.0% | 89.9% |
| 2c0nA00 | 3.90.550.40 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.61 | 48.0 | 3.27e-01 | 86.8% | 95.3% |
| 1o67C00 | 2.40.33.20 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.60 | 53.0 | 3.54e-01 | 100.0% | 70.0% |
| 2vdwG00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 45.0 | 2.91e-01 | 84.9% | 39.1% |
| 3cihA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 51.0 | 3.96e-01 | 100.0% | 74.8% |
| 1pguA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 45.0 | 2.90e-01 | 86.8% | 26.0% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 44.0 | 2.73e-01 | 84.9% | 31.4% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 47.0 | 2.97e-01 | 100.0% | 36.5% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 46.0 | 2.99e-01 | 100.0% | 30.0% |
| 3jbtA06 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 42.0 | 2.64e-01 | 84.9% | 26.0% |
| 3b7kB01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 2.95e-01 | 77.4% | 52.9% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.55 | 40.0 | 2.61e-01 | 81.1% | 96.0% |
| 4hdjA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 39.0 | 2.47e-01 | 86.8% | 89.0% |
| 2n1hA00 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.51 | 38.0 | 3.34e-01 | 88.7% | 86.2% |
| 3g9vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.17e-01 | 73.6% | 94.8% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 71.0 | 7.09e-01 | 88.7% | 96.4% |
| 3218844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 74.0 | 6.10e-01 | 94.3% | 64.4% |
| 3306779 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.84 | 72.0 | 6.74e-01 | 94.3% | 100.0% |
| 142633 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.84 | 71.0 | 6.61e-01 | 94.3% | 98.5% |
| 4419948 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.83 | 71.0 | 6.62e-01 | 92.5% | 96.9% |
| 4213539 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.83 | 70.0 | 6.54e-01 | 92.5% | 98.5% |
| 4158157 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.83 | 71.0 | 6.66e-01 | 94.3% | 100.0% |
| 4086925 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.82 | 70.0 | 6.58e-01 | 94.3% | 96.9% |
| 4073200 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.82 | 71.0 | 6.59e-01 | 94.3% | 100.0% |
| 3265170 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.82 | 70.0 | 6.58e-01 | 94.3% | 100.0% |
| 3391556 | 4.1.1.384 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st | 0.81 | 69.0 | 5.50e-01 | 94.3% | 57.1% |
| 4292289 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.81 | 69.0 | 6.42e-01 | 92.5% | 96.9% |
| 4077367 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.81 | 67.0 | 6.24e-01 | 90.6% | 98.5% |
| 4146937 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.81 | 68.0 | 6.34e-01 | 92.5% | 96.9% |
| 4037383 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.80 | 68.0 | 6.40e-01 | 94.3% | 100.0% |
| 3948467 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.80 | 68.0 | 6.31e-01 | 92.5% | 100.0% |
| 3578824 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.80 | 68.0 | 5.66e-01 | 94.3% | 57.8% |
| 4028885 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.79 | 71.0 | 6.59e-01 | 98.1% | 100.0% |
| 4284764 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.79 | 70.0 | 6.48e-01 | 96.2% | 98.5% |
| 5005813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 63.0 | 6.49e-01 | 90.6% | 92.0% |
| 2138090 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.78 | 65.0 | 6.14e-01 | 94.3% | 100.0% |
| 4010317 | 4.1.1.395 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27398 | 0.78 | 68.0 | 6.43e-01 | 100.0% | 92.3% |
| 4038269 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.77 | 70.0 | 6.54e-01 | 100.0% | 100.0% |
| 4946993 | 4.1.1.479 ↗ | beta barrels › SH3 › SH3 › SH3 › eIF-5a | 0.76 | 64.0 | 5.89e-01 | 94.3% | 92.9% |
| 3223271 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 66.0 | 5.56e-01 | 94.3% | 61.2% |
| 4931072 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.74 | 62.0 | 5.68e-01 | 94.3% | 92.9% |
| 3643549 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.74 | 61.0 | 5.36e-01 | 92.5% | 82.5% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 62.0 | 5.77e-01 | 92.5% | 92.3% |
| 3466927 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.73 | 57.0 | 4.81e-01 | 86.8% | 85.6% |
| 4962900 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.71 | 50.0 | 4.15e-01 | 73.6% | 47.2% |
| 3282690 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.71 | 62.0 | 4.78e-01 | 100.0% | 46.7% |
| 3079243 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.68 | 48.0 | 4.12e-01 | 75.5% | 76.5% |
| 3854638 | 4.1.1.131 ↗ | beta barrels › SH3 › SH3 › SH3 › MLVIN_C | 0.66 | 51.0 | 4.26e-01 | 88.7% | 59.0% |
| 4049734 | 1.16.1.5 ↗ | beta barrels › cradle loop barrel › Baseplate wedge protein gp6 domain I › Baseplate wedge protein gp6 domain I › Baseplate_J | 0.64 | 53.0 | 4.75e-01 | 92.5% | 72.0% |
| 1685099 | 1.1.7.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N | 0.63 | 51.0 | 4.93e-01 | 92.5% | 79.7% |
| 3232865 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 47.0 | 3.49e-01 | 81.1% | 85.2% |
| 3609929 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.60 | 47.0 | 2.77e-01 | 86.8% | 27.7% |
| 3500448 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.32e-01 | 88.7% | 95.4% |
| 4562940 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.58 | 49.0 | 3.00e-01 | 98.1% | 92.4% |
| 3485655 | 5.1.4.528 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_IFT80_2nd | 0.57 | 46.0 | 2.80e-01 | 90.6% | 80.0% |
| 3223991 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 43.0 | 2.66e-01 | 81.1% | 45.9% |
| 3720799 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 47.0 | 2.92e-01 | 100.0% | 97.9% |
| 2804721 | 5.1.11.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › PQQ_2 | 0.55 | 40.0 | 2.45e-01 | 79.2% | 24.3% |
| 3623874 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.54 | 47.0 | 3.49e-01 | 98.1% | 85.9% |
| 3685207 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.53 | 46.0 | 3.38e-01 | 100.0% | 70.1% |
| 3920121 | 5.1.4.281 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Hyd_WA, Tectonin | 0.51 | 42.0 | 2.79e-01 | 100.0% | 80.8% |