←Back to structures
MW057859.1__QPB12474.1__X__00009
Bact-VirMW057859.1__QPB12474.1__X__00009
Identity
- Accession:
- MW057859 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 116-240
Domain cluster:
rep: MF403009.1__ASV44799.1__X__00057__D111-225
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.64 | 30.0 | 3.72e-01 | 95.2% | 69.7% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 33.0 | 4.17e-01 | 76.0% | 82.9% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.63 | 43.0 | 4.76e-01 | 83.2% | 87.9% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.62 | 37.0 | 4.29e-01 | 96.0% | 83.3% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.57 | 40.0 | 4.14e-01 | 97.6% | 76.9% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.57 | 27.0 | 3.43e-01 | 97.6% | 76.1% |
| 2h2yA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 35.0 | 3.61e-01 | 80.0% | 69.8% |
| 1x23B00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 34.0 | 3.20e-01 | 80.0% | 52.6% |
| 3kw2A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.52 | 25.0 | 3.34e-01 | 76.8% | 85.3% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.51 | 28.0 | 3.38e-01 | 80.8% | 85.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946504 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 33.0 | 4.25e-01 | 75.2% | 88.6% |
| 4946505 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 33.0 | 4.26e-01 | 75.2% | 88.6% |
| 3431969 | 708.1.1.8 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 | 0.60 | 43.0 | 4.47e-01 | 77.6% | 79.1% |
| 3370322 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.60 | 36.0 | 4.12e-01 | 84.0% | 81.1% |
| 3258377 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.60 | 39.0 | 4.51e-01 | 99.2% | 92.2% |
| 4250029 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.59 | 32.0 | 3.82e-01 | 76.0% | 80.0% |
| 3533688 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 35.0 | 4.35e-01 | 89.6% | 98.7% |
| 3241869 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 34.0 | 3.58e-01 | 97.6% | 63.6% |
| 4819450 | 110.1.1.5 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CENP-N | 0.57 | 41.0 | 3.99e-01 | 96.8% | 66.2% |
| 3933100 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 32.0 | 3.95e-01 | 87.2% | 95.7% |
| 3258280 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 48.0 | 3.85e-01 | 96.8% | 85.5% |
| 4946507 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 31.0 | 3.65e-01 | 75.2% | 86.7% |
| 3688082 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 43.0 | 4.06e-01 | 83.2% | 76.0% |
| 4026098 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.54 | 35.0 | 3.29e-01 | 80.0% | 54.0% |
| 3246551 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.53 | 38.0 | 2.67e-01 | 91.2% | 22.4% |
| 3444177 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 32.0 | 3.84e-01 | 83.2% | 93.8% |
| 4973090 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.53 | 35.0 | 3.88e-01 | 76.8% | 85.0% |
| 3274239 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.52 | 38.0 | 3.99e-01 | 94.4% | 82.6% |
| 4014419 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.52 | 41.0 | 2.91e-01 | 99.2% | 26.6% |
| 3408937 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 33.0 | 3.91e-01 | 88.0% | 97.5% |
| 5036065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 30.0 | 3.57e-01 | 75.2% | 90.7% |
| 3786464 | 708.1.1.5 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › AFT | 0.52 | 38.0 | 4.15e-01 | 86.4% | 93.2% |
| 1291144 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.52 | 37.0 | 3.89e-01 | 100.0% | 80.3% |
| 4355722 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 33.0 | 3.65e-01 | 77.6% | 82.1% |
| 4001272 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.52 | 35.0 | 2.42e-01 | 89.6% | 17.8% |
| 3695375 | 213.1.1.22 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N | 0.51 | 44.0 | 3.97e-01 | 93.6% | 95.4% |
| 3226411 | 243.1.1.82 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 | 0.50 | 37.0 | 3.53e-01 | 76.0% | 89.3% |
| 3950341 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.50 | 40.0 | 2.94e-01 | 88.0% | 72.1% |
| 3220519 | 213.1.1.22 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N | 0.50 | 43.0 | 3.94e-01 | 92.0% | 87.5% |
D2
medium
residues 7-42
D3
medium
residues 46-108