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MW057859.1__QPB12513.1__X__00048

Bact-Vir

MW057859.1__QPB12513.1__X__00048

Identity

Accession:
MW057859 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-76
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06223.19 best Phage_tail_T 44.1 3.30e-11 100.0% 83.6%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nkhE00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.59 43.0 2.98e-01 77.1% 51.9%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.55 39.0 3.64e-01 74.3% 76.7%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.54 38.0 2.90e-01 75.7% 83.2%
1yz6A02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.51 34.0 3.23e-01 70.0% 77.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4269761 142.1.1.1 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 0.51 36.0 2.76e-01 77.1% 73.7%