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MW057859.1__QPB12515.1__X__00050

Bact-Vir

MW057859.1__QPB12515.1__X__00050

Identity

Accession:
MW057859 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Providencia_phage_PSTCR8lys

TaxID: 2783551

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-105
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04383.20 best KilA-N 51.5 1.10e-13 100.0% 89.7%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bm8A00 3.10.260.10 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain 0.69 55.0 5.57e-01 100.0% 86.9%
1wfxA01 1.10.10.970 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain 0.69 40.0 4.58e-01 75.2% 80.3%
6e3aA01 1.10.10.970 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain 0.66 40.0 4.44e-01 76.2% 77.6%
7kw8A01 1.10.10.970 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain 0.66 39.0 4.43e-01 76.2% 79.5%
7agpA01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 33.0 4.11e-01 85.1% 83.6%
4zbwA02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 42.0 4.51e-01 100.0% 94.3%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 38.0 3.87e-01 83.2% 70.9%
6teyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 34.0 3.78e-01 93.1% 83.6%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 35.0 3.95e-01 77.2% 89.3%
1g4dA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 4.04e-01 87.1% 98.6%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.53 38.0 3.58e-01 89.1% 59.4%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 35.0 3.67e-01 83.2% 76.3%
3va7A05 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.51 41.0 4.13e-01 88.1% 94.0%
1hufA00 3.30.1570.10 Alpha Beta › 2-Layer Sandwich › YopH tyrosine phosphatase N-terminal domain › Protein-tyrosine phosphatase, YopH, N-terminal domain 0.50 42.0 3.92e-01 89.1% 78.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3176091 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.72 64.0 5.04e-01 100.0% 72.7%
3197602 101.1.9.6 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N 0.68 54.0 4.97e-01 100.0% 66.2%
3203041 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 59.0 5.95e-01 98.0% 94.0%
4954530 101.1.9.143 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM 0.65 58.0 5.57e-01 99.0% 96.5%
3182948 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 36.0 4.26e-01 86.1% 93.7%
4031520 101.1.9.64 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_23 0.59 37.0 4.30e-01 86.1% 96.9%
3599768 108.1.1.44 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › FCaBP_EF-hand 0.57 44.0 3.81e-01 88.1% 52.5%
5041345 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 41.0 4.43e-01 96.0% 97.5%
3214972 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.55 40.0 4.28e-01 77.2% 89.4%
4934340 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.54 36.0 3.70e-01 85.1% 70.0%
5047188 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.53 43.0 3.98e-01 89.1% 96.3%
4410759 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 24.0 2.34e-01 89.1% 38.3%
5005155 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 35.0 3.48e-01 85.1% 62.7%
3386797 4964.1.1.1 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.53 41.0 3.29e-01 87.1% 94.2%
3785619 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 25.0 2.43e-01 89.1% 40.0%
3645693 101.1.2.516 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25895 0.52 35.0 3.52e-01 94.1% 69.0%
4932931 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.52 35.0 3.41e-01 95.0% 62.7%
5078958 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 36.0 3.55e-01 85.1% 68.6%
4994641 304.19.1.1 ↗ a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.51 40.0 4.10e-01 83.2% 90.5%
4261796 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 35.0 3.57e-01 85.1% 70.0%
4653037 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 34.0 3.28e-01 90.1% 57.5%
5025962 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 34.0 3.70e-01 80.2% 86.3%
5066879 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 34.0 3.26e-01 85.1% 59.1%
3524337 101.1.2.288 ↗ alpha arrays › HTH › HTH › winged helix domain › Stk19 0.50 32.0 3.52e-01 76.2% 81.2%
D2 high residues 110-164
PDB
Domain cluster: representative