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MW074126.1__QXO06411.1__X__00095

Bact-Vir

MW074126.1__QXO06411.1__X__00095

Identity

Accession:
MW074126 ↗
Kingdom:
phage

Quality

71.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-49
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3szpB02 3.40.190.290 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.59 49.0 3.35e-01 98.0% 87.9%
3edmD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 3.31e-01 100.0% 96.7%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 44.0 2.98e-01 100.0% 77.8%
5k2mA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 42.0 3.56e-01 93.9% 79.2%
3fzvD02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 41.0 3.45e-01 98.0% 89.0%
1e9rD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 2.72e-01 100.0% 80.1%
4n13A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 43.0 3.45e-01 100.0% 98.3%
3h16B00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.53 43.0 3.31e-01 100.0% 86.1%
4ohxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 2.71e-01 93.9% 71.9%
2j0aA00 3.90.550.50 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.51 40.0 2.75e-01 100.0% 73.3%
3od1A02 3.40.50.12590 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 39.0 3.78e-01 87.8% 96.6%
2vvpC00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.51 42.0 3.06e-01 100.0% 71.5%
3gxhA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 37.0 2.75e-01 85.7% 42.3%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3730250 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.61 49.0 3.29e-01 100.0% 80.4%
3583034 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.59 49.0 3.08e-01 100.0% 72.5%
4610503 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.59 47.0 3.26e-01 95.9% 96.5%
3410668 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.59 48.0 3.58e-01 100.0% 71.3%
3674449 2003.1.2.164 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NmrA 0.59 43.0 3.65e-01 79.6% 75.3%
3941744 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.58 49.0 3.64e-01 100.0% 72.1%
4617559 2007.1.1.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_3 0.58 48.0 3.30e-01 100.0% 86.5%
3419267 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 46.0 3.45e-01 100.0% 59.3%
3434380 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.56 45.0 3.00e-01 100.0% 82.4%
3405675 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.56 45.0 3.46e-01 100.0% 74.1%
1806519 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.54 42.0 3.87e-01 95.9% 94.4%
3956511 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.53 44.0 3.25e-01 100.0% 80.7%
4984722 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 43.0 3.11e-01 100.0% 81.8%
3677827 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.50 41.0 3.53e-01 100.0% 88.9%
4436240 7502.1.1.6 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C 0.50 41.0 3.98e-01 93.9% 85.5%