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MW074126.1__QXO06532.1__X__00216

Bact-Vir

MW074126.1__QXO06532.1__X__00216

Identity

Accession:
MW074126 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-63
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7kl6A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.82 73.0 5.44e-01 96.8% 45.8%
1a97B00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.81 72.0 5.39e-01 100.0% 41.2%
1o57B02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.81 61.0 4.22e-01 80.6% 31.6%
1vdmG00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.81 72.0 5.29e-01 96.8% 40.8%
5vogA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.81 74.0 5.22e-01 100.0% 42.0%
5bqpD00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.80 73.0 5.15e-01 100.0% 43.8%
1vchD00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.80 58.0 4.15e-01 77.4% 29.5%
2xbuA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.79 71.0 4.91e-01 100.0% 47.0%
1w8gA00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.66 46.0 3.14e-01 72.6% 24.3%
8b3yA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 42.0 2.69e-01 71.0% 32.3%
4h0nA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 52.0 3.72e-01 100.0% 43.1%
3futA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 49.0 3.48e-01 91.9% 48.7%
2z04A01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 49.0 4.33e-01 90.3% 97.8%
2ywrA00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.60 48.0 3.38e-01 91.9% 65.1%
4wctA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 50.0 3.43e-01 96.8% 95.8%
3cggA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 48.0 3.49e-01 93.5% 58.1%
4ivnA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.58 43.0 3.23e-01 85.5% 34.0%
1kjqA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 49.0 3.96e-01 95.2% 84.3%
4dimA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 48.0 3.97e-01 96.8% 86.6%
7en7A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 43.0 3.21e-01 85.5% 34.4%
5uqiA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 43.0 3.18e-01 85.5% 37.8%
4rk5A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 39.0 3.15e-01 72.6% 64.7%
4ywoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 3.55e-01 83.9% 76.1%
1gsoA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 44.0 3.92e-01 90.3% 80.9%
2r7kA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 43.0 3.72e-01 93.5% 75.7%
1vkzA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 42.0 4.03e-01 88.7% 84.4%
4ha7B00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.54 37.0 2.70e-01 74.2% 61.0%
3t38A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 42.0 3.41e-01 88.7% 75.0%
2dc1A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 43.0 3.51e-01 95.2% 68.9%
3hbaA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 44.0 3.29e-01 100.0% 50.8%
3vn5A02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 45.0 3.29e-01 100.0% 86.6%
4f3yA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 3.29e-01 95.2% 63.5%
2vx2A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.52 36.0 2.66e-01 75.8% 41.2%
1ydwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 3.41e-01 95.2% 89.8%
2xdqB04 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 40.0 3.61e-01 91.9% 91.5%
4htyA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 38.0 2.48e-01 85.5% 26.1%
3sllB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 41.0 2.94e-01 93.5% 55.9%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4948734 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.84 58.0 4.39e-01 72.6% 38.4%
5054530 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.84 71.0 5.25e-01 91.9% 39.3%
5006081 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.83 74.0 5.50e-01 96.8% 42.8%
4979033 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.83 73.0 5.12e-01 96.8% 40.0%
4972839 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.83 76.0 5.16e-01 100.0% 54.0%
3387815 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.82 70.0 5.21e-01 91.9% 42.1%
5008067 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.82 58.0 4.23e-01 74.2% 34.8%
4990519 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.81 55.0 4.03e-01 71.0% 32.5%
4949082 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.81 59.0 4.13e-01 75.8% 30.9%
10668 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.81 73.0 5.32e-01 96.8% 41.1%
4625805 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.81 57.0 3.91e-01 74.2% 26.5%
3740715 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.81 73.0 5.00e-01 100.0% 43.4%
4074219 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.80 58.0 4.17e-01 75.8% 33.3%
2753543 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.80 73.0 5.43e-01 100.0% 45.9%
1562412 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.80 72.0 5.13e-01 100.0% 40.7%
4984715 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.80 73.0 4.90e-01 100.0% 42.7%
4945706 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.79 70.0 5.06e-01 96.8% 38.2%
4474455 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.79 57.0 4.13e-01 75.8% 33.5%
4133462 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.79 57.0 4.20e-01 75.8% 35.9%
10667 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.79 58.0 4.16e-01 77.4% 30.4%
2966519 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.78 57.0 4.02e-01 77.4% 28.7%
3959658 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.75 63.0 4.53e-01 93.5% 38.9%
1645862 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.65 44.0 3.67e-01 72.6% 80.9%
5022415 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.63 50.0 4.17e-01 87.1% 72.7%
4991812 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.62 48.0 3.19e-01 88.7% 70.0%
4931967 7563.1.1.13 a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › PF27219 0.61 49.0 3.71e-01 93.5% 72.2%
4952767 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.61 47.0 4.01e-01 85.5% 51.4%
4934266 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.61 46.0 3.40e-01 85.5% 34.4%
4974380 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.61 49.0 3.38e-01 91.9% 51.1%
4540228 2007.1.2.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.61 41.0 2.86e-01 72.6% 20.6%
4997225 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.60 49.0 3.33e-01 93.5% 51.2%
5074763 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.59 45.0 3.37e-01 87.1% 44.4%
5044545 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.59 44.0 3.39e-01 85.5% 37.6%
4956866 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.59 45.0 3.27e-01 87.1% 42.5%
4664736 2003.1.1.292 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PF27219 0.59 46.0 3.60e-01 88.7% 73.1%
1603114 2003.1.10.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RS_preATP-grasp-like 0.59 50.0 4.21e-01 96.8% 88.0%
4972064 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.59 43.0 3.34e-01 85.5% 37.1%
4990295 2003.1.1.65 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 0.58 45.0 3.56e-01 88.7% 62.1%
3329718 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.57 47.0 3.35e-01 100.0% 44.8%
4081519 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.57 43.0 3.11e-01 85.5% 30.5%
3164034 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.57 43.0 3.11e-01 85.5% 32.3%
4173511 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.56 42.0 3.13e-01 85.5% 33.3%
5058473 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.56 47.0 3.35e-01 95.2% 97.5%
3875186 2003.1.10.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › ATPgrasp_N 0.56 42.0 3.45e-01 88.7% 60.0%
3474321 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.54 41.0 2.83e-01 85.5% 63.3%
4938079 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 47.0 3.56e-01 100.0% 39.4%
5023428 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.54 43.0 3.79e-01 93.5% 96.0%
100148 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.53 44.0 3.77e-01 98.4% 89.2%
5010151 2003.1.3.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.53 41.0 3.28e-01 91.9% 61.4%
5063988 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.52 40.0 3.43e-01 88.7% 60.0%
4379364 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.52 37.0 2.54e-01 79.0% 32.2%
3886098 2484.1.1.120 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 0.51 41.0 3.06e-01 96.8% 58.9%
3961141 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.50 34.0 2.55e-01 72.6% 39.5%