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MW082584.1__QPI13782.1__MYO4S_00026__00026

Bact-Vir

MW082584.1__QPI13782.1__MYO4S_00026__00026

Identity

Accession:
MW082584 ↗
Kingdom:
phage

Quality

80.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-87
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lydA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.72 55.0 4.54e-01 79.8% 51.4%
3ugvA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.71 48.0 4.21e-01 70.2% 85.7%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.69 51.0 4.34e-01 78.6% 83.1%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 59.0 5.30e-01 98.8% 96.5%
3wewA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 47.0 3.32e-01 72.6% 73.0%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.65 48.0 3.81e-01 77.4% 49.7%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 40.0 3.47e-01 70.2% 40.6%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.64 47.0 3.93e-01 78.6% 56.4%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.63 49.0 3.58e-01 85.7% 45.2%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 45.0 3.72e-01 78.6% 65.8%
3djcB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 49.0 4.90e-01 88.1% 83.0%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.61 52.0 5.12e-01 95.2% 95.5%
3f7sA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 3.84e-01 97.6% 47.9%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 44.0 3.02e-01 77.4% 62.3%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 49.0 4.22e-01 89.3% 92.3%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 43.0 3.20e-01 78.6% 85.8%
2xgrA00 3.40.570.10 Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A 0.58 42.0 3.24e-01 76.2% 76.1%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 51.0 4.46e-01 100.0% 99.2%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 48.0 3.63e-01 92.9% 77.2%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 45.0 3.50e-01 100.0% 38.9%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 43.0 3.22e-01 79.8% 77.0%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 48.0 4.19e-01 91.7% 97.6%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 41.0 4.14e-01 73.8% 89.0%
2qddA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 46.0 4.00e-01 88.1% 94.6%
1e3uD00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 42.0 3.15e-01 82.1% 63.6%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 51.0 3.31e-01 100.0% 52.8%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.55 48.0 4.26e-01 97.6% 96.7%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.16e-01 95.2% 29.1%
4e72A01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.54 37.0 3.33e-01 71.4% 93.5%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 48.0 3.18e-01 100.0% 35.3%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 48.0 3.12e-01 100.0% 27.4%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.53 44.0 3.26e-01 94.0% 48.3%
4gxbA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 46.0 4.34e-01 97.6% 94.2%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.90e-01 100.0% 22.4%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 48.0 3.08e-01 100.0% 26.7%
4ibnA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 43.0 3.43e-01 92.9% 46.8%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.87e-01 91.7% 98.3%
2lg7A00 2.60.60.50 Mainly Beta › Sandwich › Lipoxygenase-1 › 0.52 36.0 3.11e-01 71.4% 92.2%
4cu7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.79e-01 91.7% 98.3%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 3.38e-01 79.8% 91.1%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.46e-01 92.9% 67.1%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 44.0 3.01e-01 100.0% 37.5%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 44.0 2.93e-01 100.0% 36.0%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.79e-01 100.0% 50.7%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 41.0 2.95e-01 95.2% 77.9%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5030147 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.73 56.0 4.58e-01 79.8% 49.0%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.73 55.0 5.04e-01 79.8% 66.4%
3468093 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.73 52.0 4.96e-01 97.6% 64.3%
3419997 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.71 51.0 4.67e-01 97.6% 57.8%
4059480 881.1.1.37 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 0.68 51.0 4.01e-01 79.8% 40.6%
5083024 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 49.0 3.11e-01 76.2% 16.7%
3863963 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.67 59.0 5.18e-01 97.6% 88.8%
3562593 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.67 54.0 4.40e-01 88.1% 56.2%
3999839 5.1.5.73 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.66 49.0 3.25e-01 78.6% 22.0%
3628460 3308.1.1.0 beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme 0.66 53.0 5.43e-01 95.2% 88.7%
4075485 11.1.1.649 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BPTA 0.65 59.0 4.57e-01 100.0% 87.8%
3468401 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 47.0 4.67e-01 94.0% 72.2%
3496522 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 53.0 3.31e-01 91.7% 27.9%
4401923 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.63 51.0 4.55e-01 86.9% 79.2%
3240591 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.63 50.0 3.58e-01 85.7% 43.6%
1944087 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.63 46.0 4.19e-01 78.6% 78.4%
3203226 2484.1.1.66 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.62 49.0 3.66e-01 85.7% 57.2%
3958652 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 47.0 3.71e-01 83.3% 38.9%
None 0.62 47.0 3.46e-01 83.3% 30.6%
3255424 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.61 48.0 3.77e-01 82.1% 57.6%
3958247 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 47.0 3.46e-01 83.3% 30.8%
3958443 2484.1.1.108 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_assoc 0.61 46.0 3.60e-01 83.3% 36.9%
4240482 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.60 49.0 3.06e-01 98.8% 17.0%
4672378 71.1.1.1 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.60 43.0 3.32e-01 76.2% 36.2%
3278704 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.59 50.0 5.12e-01 94.0% 100.0%
3373744 5.1.4.241 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A 0.59 48.0 3.03e-01 86.9% 19.1%
3715739 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.59 53.0 3.34e-01 100.0% 48.4%
3934135 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 46.0 3.95e-01 83.3% 77.7%
3928228 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.59 48.0 3.51e-01 90.5% 47.9%
3701010 5.1.3.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.59 49.0 3.30e-01 90.5% 37.1%
3603591 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 54.0 3.46e-01 100.0% 33.6%
4015830 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 53.0 3.27e-01 98.8% 36.3%
3694872 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 51.0 3.25e-01 100.0% 19.3%
None 0.58 53.0 3.54e-01 100.0% 36.8%
4993562 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 45.0 4.19e-01 86.9% 66.7%
3497267 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 41.0 2.78e-01 76.2% 30.0%
3802472 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.57 52.0 3.49e-01 100.0% 37.4%
2785694 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.57 43.0 3.81e-01 82.1% 93.0%
4333087 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.57 41.0 2.75e-01 76.2% 36.6%
4031576 71.1.1.5 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF576 0.57 51.0 3.74e-01 100.0% 74.0%
3987365 896.1.1.4 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 0.57 41.0 4.19e-01 88.1% 81.2%
3621723 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.56 41.0 3.02e-01 91.7% 26.8%
3479441 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 43.0 2.90e-01 82.1% 67.3%
1269295 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.56 51.0 3.37e-01 100.0% 35.0%
4883419 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.56 51.0 3.36e-01 100.0% 35.0%
4661228 809.1.1.1 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA 0.54 38.0 3.79e-01 73.8% 98.9%
3672774 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.54 45.0 3.66e-01 94.0% 61.2%
2229 5.1.4.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Me-amine-dh_H 0.53 48.0 3.12e-01 100.0% 27.4%
3258377 331.23.1.0 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.53 43.0 4.24e-01 98.8% 85.6%
3404941 220.1.1.15 beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 0.53 46.0 3.72e-01 100.0% 75.9%
3200374 11.1.1.14 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.52 41.0 3.91e-01 85.7% 100.0%
3220656 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 43.0 2.97e-01 94.0% 36.0%
2526821 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.52 43.0 3.13e-01 91.7% 45.5%
4003463 220.1.1.168 beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.52 46.0 4.05e-01 98.8% 73.6%
3236693 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 3.07e-01 95.2% 27.9%
3176331 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 42.0 3.48e-01 91.7% 55.2%
3169953 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.52 41.0 3.44e-01 91.7% 77.6%
3787114 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 41.0 3.35e-01 94.0% 71.4%
4142339 4099.1.1.4 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O 0.51 37.0 3.24e-01 79.8% 53.6%
5024225 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.51 44.0 3.13e-01 100.0% 50.2%
4978484 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.50 39.0 3.44e-01 85.7% 86.2%