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MW084976.1__QOV08204.1__Kirov_5__00005
Bact-VirMW084976.1__QOV08204.1__Kirov_5__00005
Identity
- Accession:
- MW084976 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 2783539
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-60
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 45.0 | 4.26e-01 | 70.4% | 93.9% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 43.0 | 3.57e-01 | 75.9% | 74.0% |
| 3tcaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 41.0 | 3.52e-01 | 70.4% | 98.9% |
| 2l73A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 43.0 | 3.28e-01 | 77.8% | 63.6% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 41.0 | 3.73e-01 | 72.2% | 90.7% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 4.05e-01 | 98.1% | 72.5% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.58 | 39.0 | 2.60e-01 | 72.2% | 49.2% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 47.0 | 4.31e-01 | 92.6% | 91.5% |
| 4dxkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 38.0 | 3.06e-01 | 70.4% | 87.2% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 40.0 | 3.16e-01 | 77.8% | 71.5% |
| 1z2mA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 39.0 | 3.49e-01 | 72.2% | 98.7% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.56 | 39.0 | 3.45e-01 | 77.8% | 77.3% |
| 4pk9A00 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.55 | 38.0 | 2.32e-01 | 72.2% | 17.0% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 3.08e-01 | 70.4% | 68.6% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 41.0 | 3.92e-01 | 83.3% | 72.7% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.54 | 39.0 | 2.80e-01 | 79.6% | 83.6% |
| 2qcuB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 42.0 | 2.84e-01 | 90.7% | 62.9% |
| 1ceeB00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.53 | 34.0 | 3.41e-01 | 96.3% | 61.0% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.53 | 36.0 | 3.35e-01 | 70.4% | 72.1% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.46e-01 | 83.3% | 86.9% |
| 4aq1A03 | 2.60.40.3440 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 35.0 | 2.84e-01 | 70.4% | 93.0% |
| 5ek8A01 | 2.60.40.3330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 2.93e-01 | 77.8% | 92.1% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 3.00e-01 | 74.1% | 56.9% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 42.0 | 3.82e-01 | 92.6% | 87.0% |
| 4mpoB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 39.0 | 2.95e-01 | 85.2% | 83.1% |
| 2y3aA01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 42.0 | 2.78e-01 | 100.0% | 35.4% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 36.0 | 3.44e-01 | 74.1% | 97.0% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.05e-01 | 92.6% | 92.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 43.0 | 3.93e-01 | 96.3% | 96.0% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.51 | 34.0 | 2.95e-01 | 70.4% | 72.8% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 32.0 | 3.12e-01 | 94.4% | 57.6% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.50e-01 | 100.0% | 49.1% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589473 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.76 | 62.0 | 5.42e-01 | 88.9% | 83.7% |
| 3351761 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.72 | 55.0 | 4.57e-01 | 88.9% | 47.4% |
| 3662203 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.71 | 54.0 | 4.60e-01 | 87.0% | 51.8% |
| 4021561 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.69 | 54.0 | 4.36e-01 | 87.0% | 47.6% |
| 3849360 | 376.1.3.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RIM2a_ZnF | 0.67 | 54.0 | 4.89e-01 | 90.7% | 66.7% |
| 4154378 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.67 | 52.0 | 5.00e-01 | 88.9% | 96.9% |
| 5049822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 51.0 | 5.55e-01 | 83.3% | 100.0% |
| 3960306 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.64 | 44.0 | 4.00e-01 | 72.2% | 81.3% |
| 3711293 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 46.0 | 4.35e-01 | 77.8% | 90.8% |
| 4532986 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.64 | 51.0 | 4.90e-01 | 94.4% | 98.5% |
| 3678038 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.63 | 44.0 | 4.03e-01 | 75.9% | 64.0% |
| 3789199 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 43.0 | 3.42e-01 | 72.2% | 87.8% |
| 3551623 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.62 | 42.0 | 3.20e-01 | 70.4% | 59.2% |
| 3170899 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.62 | 41.0 | 3.45e-01 | 70.4% | 40.0% |
| 3517917 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 47.0 | 4.48e-01 | 85.2% | 96.9% |
| 3189419 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.61 | 44.0 | 2.77e-01 | 75.9% | 73.9% |
| 1560725 | 3974.1.1.1 ↗ | beta duplicates or obligate multimers › EBNA-2 N-terminal dimerization (END) domain › EBNA-2 N-terminal dimerization (END) domain › EBNA-2 N-terminal dimerization (END) domain › EBNA2_N | 0.61 | 37.0 | 3.61e-01 | 72.2% | 50.0% |
| 3582308 | 220.1.1.16 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF1681 | 0.60 | 49.0 | 4.06e-01 | 88.9% | 74.7% |
| 3379810 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 40.0 | 3.89e-01 | 70.4% | 85.0% |
| 3664617 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.58 | 46.0 | 4.05e-01 | 88.9% | 71.8% |
| 3391162 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 41.0 | 2.69e-01 | 75.9% | 61.6% |
| 3375524 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.58 | 48.0 | 3.67e-01 | 90.7% | 80.8% |
| 3641356 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.58 | 39.0 | 3.59e-01 | 70.4% | 77.3% |
| 1203379 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 39.0 | 2.60e-01 | 72.2% | 49.0% |
| 4964082 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.57 | 41.0 | 2.75e-01 | 90.7% | 19.1% |
| 3450430 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 45.0 | 3.19e-01 | 88.9% | 76.0% |
| 4594302 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 47.0 | 3.75e-01 | 94.4% | 54.8% |
| 3781077 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.56 | 42.0 | 3.41e-01 | 79.6% | 43.7% |
| 3743393 | 59.1.4.2 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 | 0.56 | 38.0 | 2.35e-01 | 74.1% | 13.0% |
| 4653150 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 45.0 | 3.66e-01 | 94.4% | 86.4% |
| 3714022 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.55 | 35.0 | 3.40e-01 | 90.7% | 58.3% |
| 3351840 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.54 | 38.0 | 3.57e-01 | 74.1% | 71.0% |
| 5018572 | 304.48.1.72 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_N | 0.53 | 40.0 | 2.75e-01 | 81.5% | 37.2% |
| 3469970 | 3785.1.1.0 ↗ | a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain | 0.53 | 41.0 | 2.99e-01 | 85.2% | 75.2% |
| 4949606 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 43.0 | 2.90e-01 | 100.0% | 67.5% |
| 4958102 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 39.0 | 3.78e-01 | 85.2% | 90.8% |
| 3270195 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.52 | 37.0 | 2.97e-01 | 74.1% | 89.6% |
| 4824578 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.52 | 36.0 | 3.62e-01 | 100.0% | 72.7% |
| 3416523 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 44.0 | 3.18e-01 | 100.0% | 72.4% |
| 3255946 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 42.0 | 3.79e-01 | 98.1% | 98.8% |
| 5048181 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.51 | 38.0 | 2.89e-01 | 92.6% | 34.1% |
| 3417192 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.50 | 35.0 | 3.70e-01 | 85.2% | 80.0% |
| 5058463 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.50 | 43.0 | 2.82e-01 | 100.0% | 65.7% |