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MW084976.1__QOV08395.1__Kirov_196__00196

Bact-Vir

MW084976.1__QOV08395.1__Kirov_196__00196

Identity

Accession:
MW084976 ↗
Kingdom:
phage

Quality

88.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirovvirus› Bacillus_phage_Kirov

TaxID: 2783539

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-57
PDB
Domain cluster: rep: IMGVR_UViG_3300009674_000599-3300009674-Ga0116173_100374215__D72-119
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 70.0 7.12e-01 100.0% 90.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 67.0 6.78e-01 100.0% 88.2%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.78 62.0 5.97e-01 100.0% 76.3%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.78 71.0 6.24e-01 100.0% 93.2%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 64.0 5.95e-01 100.0% 73.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 6.32e-01 100.0% 83.9%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 69.0 6.44e-01 100.0% 85.5%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.57e-01 100.0% 94.1%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 67.0 6.68e-01 100.0% 94.3%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 67.0 5.19e-01 100.0% 52.8%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 63.0 6.45e-01 100.0% 98.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 66.0 5.83e-01 100.0% 79.2%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 4.93e-01 100.0% 47.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 4.78e-01 100.0% 47.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 58.0 6.06e-01 96.1% 100.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.79e-01 100.0% 94.9%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 4.95e-01 100.0% 54.2%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.36e-01 100.0% 81.4%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.68 58.0 5.87e-01 100.0% 98.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.54e-01 100.0% 93.2%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 56.0 5.30e-01 100.0% 93.8%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 46.0 4.35e-01 92.2% 61.3%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.65 52.0 3.98e-01 90.2% 43.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 55.0 5.13e-01 100.0% 86.6%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 4.88e-01 100.0% 79.2%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 5.24e-01 100.0% 91.5%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 52.0 3.92e-01 100.0% 68.8%
2gqfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 51.0 3.31e-01 96.1% 61.8%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 54.0 4.48e-01 100.0% 78.0%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 3.33e-01 92.2% 67.5%
4p0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 3.20e-01 100.0% 33.0%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 43.0 4.29e-01 94.1% 78.2%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 39.0 3.08e-01 100.0% 33.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.57 47.0 3.89e-01 100.0% 75.0%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.57 43.0 3.55e-01 100.0% 45.3%
1jvnA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 44.0 2.84e-01 96.1% 34.8%
3w0fA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.56 46.0 3.63e-01 100.0% 63.9%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.55 44.0 4.04e-01 100.0% 66.2%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.55 44.0 4.01e-01 100.0% 66.2%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 44.0 3.60e-01 100.0% 48.9%
4ktbA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 37.0 2.68e-01 72.5% 74.4%
2rl8A00 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.53 43.0 3.26e-01 96.1% 93.9%
1h8uB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.53 44.0 3.53e-01 100.0% 92.2%
2qqzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 40.0 3.19e-01 88.2% 80.0%
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.52 41.0 3.27e-01 100.0% 45.5%
2afpA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 43.0 3.31e-01 98.0% 74.4%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3537417 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.89 68.0 7.24e-01 100.0% 93.3%
3347851 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.87 68.0 6.10e-01 100.0% 61.4%
3662072 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 71.0 5.21e-01 100.0% 37.5%
3818610 4.1.1.324 ↗ beta barrels › SH3 › SH3 › SH3 › Nodulin_C 0.85 77.0 6.22e-01 100.0% 92.5%
3657300 4.1.1.190 ↗ beta barrels › SH3 › SH3 › SH3 › Transposase_23 0.83 74.0 6.33e-01 100.0% 98.8%
3449742 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.82 75.0 6.86e-01 100.0% 87.7%
3653487 4.1.1.324 ↗ beta barrels › SH3 › SH3 › SH3 › Nodulin_C 0.82 74.0 6.08e-01 100.0% 88.9%
3284223 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 74.0 6.63e-01 100.0% 74.3%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.81 65.0 6.03e-01 100.0% 69.2%
3434219 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.80 73.0 5.81e-01 100.0% 63.2%
4093836 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 70.0 6.64e-01 100.0% 83.3%
3461921 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.78 73.0 5.68e-01 100.0% 56.0%
3469279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 65.0 5.71e-01 100.0% 62.7%
3256432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 68.0 6.49e-01 100.0% 83.3%
3370389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.47e-01 100.0% 87.7%
3323533 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.77 70.0 6.43e-01 100.0% 86.2%
3666563 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 70.0 6.42e-01 100.0% 86.2%
3568329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 6.53e-01 100.0% 85.0%
3365104 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.76 70.0 6.37e-01 100.0% 86.2%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 66.0 4.79e-01 100.0% 36.3%
3323551 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.76 69.0 6.35e-01 100.0% 86.2%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.76 68.0 4.84e-01 100.0% 35.2%
3323530 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.76 69.0 6.36e-01 100.0% 84.6%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 66.0 6.10e-01 100.0% 75.4%
5035447 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.18e-01 100.0% 76.9%
5051313 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 6.24e-01 100.0% 80.0%
3488114 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 4.97e-01 100.0% 41.7%
3834303 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.75 64.0 3.70e-01 100.0% 10.8%
3323529 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.75 68.0 6.22e-01 100.0% 86.2%
3609116 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 4.62e-01 100.0% 39.3%
3629536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.40e-01 100.0% 53.7%
3637508 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.75 67.0 6.20e-01 100.0% 78.5%
4420340 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.97e-01 100.0% 80.0%
5024264 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.74 60.0 5.26e-01 100.0% 60.0%
3738641 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.73 66.0 5.78e-01 100.0% 68.0%
3503332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.87e-01 98.0% 98.5%
3574784 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 62.0 4.72e-01 100.0% 42.7%
3593222 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 5.36e-01 100.0% 61.0%
3323558 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.73 64.0 6.14e-01 100.0% 93.3%
3768347 4.1.1.230 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7030 0.72 63.0 5.89e-01 100.0% 89.2%
3788538 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.72 64.0 4.75e-01 100.0% 45.4%
3523802 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 64.0 6.05e-01 100.0% 85.0%
3842631 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.71 63.0 5.71e-01 100.0% 72.9%
3894798 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.71 56.0 5.90e-01 92.2% 100.0%
4888491 4.1.1.73 ↗ beta barrels › SH3 › SH3 › SH3 › Cul7 0.71 55.0 5.32e-01 84.3% 78.9%
5050226 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.70 59.0 4.69e-01 100.0% 47.0%
3519122 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.70 59.0 5.01e-01 100.0% 65.6%
3474075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.41e-01 100.0% 81.1%
4870495 304.169.1.1 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL 0.70 59.0 4.73e-01 100.0% 53.7%
3888349 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.69 61.0 4.51e-01 100.0% 38.5%
3911348 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 4.50e-01 100.0% 38.5%
3570230 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 59.0 4.92e-01 100.0% 67.8%
2866962 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.67 56.0 4.56e-01 100.0% 54.6%
3814411 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 60.0 4.74e-01 100.0% 50.5%
3460576 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.67 53.0 3.33e-01 86.3% 23.8%
5042797 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.67 56.0 5.37e-01 100.0% 80.0%
3758536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.26e-01 100.0% 77.1%
3828749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.14e-01 100.0% 77.3%
3483363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.24e-01 100.0% 78.5%
3604617 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.65 53.0 3.95e-01 100.0% 35.6%
1824182 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 56.0 4.88e-01 100.0% 79.2%
4020870 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 52.0 3.03e-01 96.1% 57.1%
5073863 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.62 52.0 4.92e-01 100.0% 87.7%
3249327 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 3.69e-01 78.4% 83.7%
4976214 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.60 42.0 2.82e-01 74.5% 69.0%
4997554 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.60 40.0 2.97e-01 72.5% 89.3%
3594572 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 3.68e-01 100.0% 38.1%
5055179 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.59 41.0 2.74e-01 74.5% 67.1%
2725438 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.58 46.0 2.84e-01 96.1% 73.0%
3471318 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 46.0 3.85e-01 98.0% 63.0%
3568994 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.56 48.0 3.49e-01 100.0% 79.3%
3964807 9.7.1.2 ↗ beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › PF28291 0.56 50.0 4.06e-01 100.0% 97.9%
3927559 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 3.67e-01 92.2% 67.6%
3465888 325.1.7.1 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl 0.55 45.0 3.91e-01 96.1% 77.6%
3321290 11.1.1.902 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N 0.54 39.0 3.03e-01 76.5% 86.1%
1018902 221.4.1.11 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › DUF4916 0.54 37.0 2.68e-01 72.5% 74.4%
3212573 708.1.2.7 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › RIG-I_C-RD 0.53 42.0 3.38e-01 98.0% 73.6%
4970624 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.52 39.0 2.26e-01 84.3% 97.1%
D2 high residues 64-108
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.78 67.0 6.53e-01 97.8% 96.0%
1gaxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 64.0 3.80e-01 100.0% 53.6%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.72 62.0 6.10e-01 100.0% 98.0%
2k2dA00 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.72 56.0 5.53e-01 93.3% 83.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 51.0 3.48e-01 100.0% 29.4%
3ir9A02 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.63 52.0 3.97e-01 100.0% 68.3%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 49.0 4.00e-01 97.8% 67.6%
3qvnA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.62 51.0 3.91e-01 100.0% 46.2%
1qxfA00 2.20.25.100 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 0.61 50.0 4.70e-01 100.0% 91.4%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 50.0 3.09e-01 100.0% 25.0%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 47.0 3.65e-01 97.8% 45.6%
1mzkA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.60 48.0 3.74e-01 100.0% 98.4%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.59 47.0 4.58e-01 97.8% 94.3%
1b33N01 3.30.1490.170 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Allophycocyanin linker chain (domain) 0.58 46.0 4.42e-01 93.3% 100.0%
1owwA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 3.87e-01 100.0% 53.8%
3x17A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 3.64e-01 93.3% 55.9%
2x9zA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.57 45.0 3.47e-01 91.1% 40.7%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.57 45.0 3.46e-01 97.8% 46.3%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 43.0 3.26e-01 95.6% 46.4%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 44.0 3.64e-01 100.0% 55.1%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.55 42.0 3.36e-01 100.0% 96.8%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.55 44.0 3.40e-01 97.8% 47.5%
3pz8C00 2.40.240.130 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › 0.55 41.0 3.59e-01 88.9% 91.4%
2ibgA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.56e-01 100.0% 47.1%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 43.0 3.44e-01 100.0% 51.7%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.34e-01 97.8% 45.0%
2h41A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 3.58e-01 100.0% 52.6%
3hzbC00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.55 43.0 3.63e-01 100.0% 48.9%
3kysA00 2.70.50.80 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.55 43.0 2.98e-01 100.0% 37.0%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.07e-01 100.0% 30.9%
6genR01 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 41.0 3.43e-01 100.0% 44.7%
1c77B00 3.10.20.130 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 42.0 3.24e-01 97.8% 36.7%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.53 41.0 3.25e-01 95.6% 49.1%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 41.0 3.31e-01 97.8% 40.6%
3v6oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.50e-01 100.0% 55.2%
1yhpA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.52 42.0 3.47e-01 97.8% 47.8%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 2.99e-01 100.0% 35.4%
4kpnA00 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.51 40.0 2.46e-01 100.0% 12.6%
1xhnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 2.94e-01 100.0% 36.7%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 39.0 3.01e-01 100.0% 35.6%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4980022 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.89 74.0 7.10e-01 93.3% 80.0%
4666101 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.85 64.0 6.44e-01 88.9% 80.0%
5078363 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.83 73.0 4.17e-01 100.0% 11.3%
5023733 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.81 68.0 4.13e-01 97.8% 15.8%
4379241 375.1.1.8 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HypA 0.81 60.0 6.32e-01 93.3% 92.5%
4163860 375.1.1.199 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MJ0401 0.81 67.0 6.73e-01 88.9% 100.0%
4469129 301.9.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.81 60.0 4.48e-01 93.3% 32.2%
4607892 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.80 61.0 6.47e-01 93.3% 92.5%
5004620 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.77 62.0 6.52e-01 93.3% 97.5%
4995774 375.1.1.185 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 0.75 60.0 6.21e-01 88.9% 100.0%
4121492 375.1.1.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 0.75 67.0 3.92e-01 97.8% 33.6%
3596216 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.74 65.0 4.43e-01 100.0% 42.5%
5045979 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.74 65.0 3.97e-01 100.0% 37.0%
3278973 375.1.1.185 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 0.74 60.0 6.33e-01 88.9% 100.0%
5052663 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 58.0 6.06e-01 88.9% 97.5%
3489248 375.1.1.45 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10 0.71 53.0 5.55e-01 93.3% 95.0%
5015298 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 60.0 5.85e-01 100.0% 88.0%
4970537 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 53.0 5.48e-01 93.3% 95.0%
3480424 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 54.0 5.62e-01 95.6% 97.5%
5061487 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.70 61.0 4.33e-01 100.0% 34.8%
3175337 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.70 58.0 4.55e-01 95.6% 65.0%
4241460 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.70 59.0 4.28e-01 100.0% 59.3%
4958689 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.70 59.0 5.44e-01 100.0% 75.0%
4956437 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.68 57.0 4.15e-01 100.0% 33.3%
3210799 375.1.1.52 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_6 0.68 53.0 4.83e-01 95.6% 62.5%
5034902 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.67 54.0 3.96e-01 100.0% 59.3%
3412402 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 53.0 4.07e-01 97.8% 77.4%
3274047 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.62 53.0 4.21e-01 100.0% 72.0%
3351981 3792.1.1.2 ↗ beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.62 52.0 4.06e-01 100.0% 42.9%
4385045 11.1.1.987 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30412 0.61 50.0 3.96e-01 100.0% 55.5%
2420836 10.9.1.0 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin 0.60 49.0 3.80e-01 100.0% 59.3%
3975705 3115.6.1.0 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon 0.59 48.0 4.73e-01 100.0% 94.0%
4353266 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.59 45.0 3.98e-01 97.8% 55.4%
4992171 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.23e-01 95.6% 72.3%
3525173 72.1.1.1 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall 0.57 46.0 3.93e-01 100.0% 51.8%
4031235 3986.2.1.2 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 0.57 46.0 4.18e-01 100.0% 90.0%
4955382 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 3.82e-01 97.8% 59.1%
3946603 10.32.1.27 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › 7TMR-DISMED2 0.56 44.0 3.25e-01 95.6% 58.6%
146929 3115.3.1.1 ↗ a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 0.56 43.0 4.20e-01 100.0% 85.7%
3939866 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 43.0 3.38e-01 97.8% 48.7%
4012583 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 42.0 3.29e-01 97.8% 48.3%
3170078 11.1.1.646 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N 0.54 43.0 3.26e-01 100.0% 55.6%
3241319 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.53 42.0 3.29e-01 100.0% 66.7%
2593098 304.139.2.1 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7f/Csy3 › Cas_Csy3 0.53 43.0 2.64e-01 100.0% 18.4%
3756826 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 43.0 3.10e-01 100.0% 30.3%
3267249 11.1.1.801 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.52 40.0 3.01e-01 97.8% 43.3%
139190 10.12.1.42 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DUF1971 0.51 40.0 3.36e-01 97.8% 45.3%
3170138 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 38.0 2.62e-01 86.7% 75.8%