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MW084976.1__QOV08439.1__Kirov_240__00240

Bact-Vir

MW084976.1__QOV08439.1__Kirov_240__00240

Identity

Accession:
MW084976 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirovvirus› Bacillus_phage_Kirov

TaxID: 2783539

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-65
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 55.0 5.42e-01 100.0% 83.1%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 51.0 4.73e-01 100.0% 67.5%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.34e-01 82.3% 67.1%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.61 49.0 4.31e-01 91.9% 90.7%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 5.19e-01 100.0% 90.9%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.60 48.0 4.36e-01 91.9% 87.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 47.0 4.61e-01 88.7% 79.1%
3kfvA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 53.0 4.53e-01 100.0% 84.0%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 48.0 4.39e-01 100.0% 66.3%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 36.0 3.50e-01 79.0% 52.1%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.61e-01 100.0% 90.9%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.19e-01 100.0% 72.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.38e-01 98.4% 86.2%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.57 43.0 4.05e-01 88.7% 65.8%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.57 39.0 2.85e-01 74.2% 83.9%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.57 43.0 4.23e-01 90.3% 77.1%
4gnxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 45.0 3.84e-01 91.9% 71.3%
4v0bA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 38.0 3.83e-01 98.4% 71.4%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 46.0 3.83e-01 100.0% 95.1%
4b1bA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 46.0 2.82e-01 95.2% 25.4%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 33.0 3.23e-01 82.3% 50.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 40.0 3.99e-01 87.1% 74.6%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 43.0 4.52e-01 100.0% 100.0%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.61e-01 95.2% 74.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 4.00e-01 100.0% 75.4%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.78e-01 95.2% 84.3%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 3.29e-01 93.5% 51.2%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 41.0 4.01e-01 91.9% 76.1%
2ymsB00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 43.0 4.08e-01 88.7% 91.9%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 43.0 2.99e-01 93.5% 52.9%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.53 45.0 3.62e-01 100.0% 60.2%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.53 36.0 3.87e-01 72.6% 100.0%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 44.0 2.79e-01 95.2% 98.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 46.0 4.15e-01 100.0% 79.3%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.46e-01 95.2% 65.7%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 3.23e-01 93.5% 45.2%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.53 43.0 3.17e-01 100.0% 80.0%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 42.0 3.10e-01 88.7% 65.1%
1c1fA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.53e-01 100.0% 83.0%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 42.0 3.38e-01 93.5% 86.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 44.0 3.27e-01 100.0% 79.1%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.58e-01 96.8% 94.2%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 43.0 4.09e-01 100.0% 76.6%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.52e-01 100.0% 89.4%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 42.0 3.28e-01 95.2% 79.5%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.51 39.0 2.81e-01 90.3% 93.2%
4k22B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 2.88e-01 95.2% 54.3%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 3.53e-01 95.2% 94.7%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 38.0 2.83e-01 83.9% 28.4%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 3.21e-01 96.8% 45.2%
4iv9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 2.89e-01 96.8% 47.9%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.47e-01 100.0% 78.4%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.61e-01 91.9% 96.8%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.81e-01 100.0% 90.9%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.41e-01 100.0% 84.7%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.51 42.0 3.12e-01 93.5% 57.7%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 42.0 3.52e-01 96.8% 94.0%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 37.0 2.64e-01 80.6% 75.0%
4lxqB00 3.40.50.12230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 34.0 2.31e-01 72.6% 57.7%
2r9zA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 3.46e-01 96.8% 94.1%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 3.16e-01 95.2% 50.3%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3486330 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 45.0 4.86e-01 96.8% 86.0%
5065184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 46.0 5.21e-01 80.6% 100.0%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 50.0 5.15e-01 100.0% 88.3%
3899589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.21e-01 98.4% 93.3%
4153553 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 40.0 4.53e-01 98.4% 91.1%
5014724 295.1.1.51 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.63 49.0 4.28e-01 88.7% 87.0%
3314585 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.62 46.0 3.15e-01 83.9% 29.8%
4176722 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.61 49.0 4.24e-01 91.9% 87.0%
3556601 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.60 47.0 4.72e-01 100.0% 83.1%
3930845 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 43.0 4.14e-01 80.6% 67.1%
3392529 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.60 48.0 4.35e-01 91.9% 91.1%
3779830 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.60 47.0 4.21e-01 100.0% 60.0%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.63e-01 93.5% 92.7%
3994170 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 46.0 3.26e-01 87.1% 40.2%
3300781 5.1.4.226 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7899 0.58 41.0 2.80e-01 75.8% 45.8%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.58 49.0 3.83e-01 100.0% 83.4%
3616007 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.58 42.0 4.36e-01 93.5% 89.1%
4269264 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.57 34.0 3.79e-01 87.1% 80.0%
5058457 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 41.0 4.13e-01 100.0% 75.4%
3715045 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.57 39.0 3.79e-01 100.0% 64.3%
3503630 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 3.85e-01 95.2% 84.3%
4512566 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.56 36.0 4.08e-01 85.5% 91.1%
5009324 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.56 39.0 3.70e-01 87.1% 58.7%
5027131 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.56 44.0 4.48e-01 98.4% 90.0%
3967396 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.56 39.0 3.92e-01 98.4% 70.8%
3244907 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 4.32e-01 100.0% 74.4%
4399722 1013.1.1.2 ↗ beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD40 0.56 42.0 2.56e-01 85.5% 62.5%
3300848 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.55 39.0 3.38e-01 90.3% 45.6%
4964699 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.55 46.0 4.06e-01 98.4% 87.0%
4532808 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.55 36.0 3.94e-01 83.9% 84.0%
4041343 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.55 40.0 4.35e-01 98.4% 100.0%
4178260 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.54 46.0 4.22e-01 100.0% 98.8%
4956223 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.54 38.0 2.54e-01 77.4% 89.5%
4930437 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.54 44.0 3.85e-01 96.8% 78.1%
4948433 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.54 41.0 4.04e-01 100.0% 77.9%
4937917 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 40.0 4.38e-01 83.9% 100.0%
4195918 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 41.0 2.82e-01 87.1% 31.0%
3500306 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 40.0 2.83e-01 83.9% 32.1%
4018320 5.1.8.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › WD40 0.53 41.0 2.94e-01 87.1% 31.6%
4485519 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 43.0 3.65e-01 95.2% 80.0%
4146527 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.52 38.0 3.12e-01 82.3% 90.0%
5752 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.52 41.0 3.04e-01 87.1% 59.5%
4871189 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 41.0 3.09e-01 91.9% 71.7%
3899848 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.52 38.0 3.38e-01 80.6% 80.0%
4019781 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.71e-01 88.7% 27.7%
4014861 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 39.0 2.65e-01 83.9% 22.4%
4888761 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.87e-01 87.1% 37.4%
5071919 220.1.1.320 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Zn_Ribbon_1 0.51 43.0 3.43e-01 98.4% 50.7%
4147581 2003.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N 0.51 41.0 2.98e-01 91.9% 78.5%
2462227 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.50 43.0 3.46e-01 100.0% 86.5%
3367795 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.50 39.0 3.42e-01 87.1% 55.8%
4948490 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.93e-01 96.8% 76.0%