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MW117965.1__QPB07852.1__X__00015
Bact-VirMW117965.1__QPB07852.1__X__00015
Identity
- Accession:
- MW117965 ↗
- Kingdom:
- phage
Quality
84.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Yellowseavirus›
Synechococcus_phage_S-H38
TaxID: 2783673
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-100
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6opmD01 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.68 | 42.0 | 2.77e-01 | 100.0% | 16.4% |
| 2d8dB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.61 | 52.0 | 4.79e-01 | 98.4% | 74.7% |
| 3ct5A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.52 | 45.0 | 3.40e-01 | 98.4% | 92.5% |
| 2b3yA01 | 3.30.499.10 | Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 | 0.50 | 45.0 | 3.02e-01 | 100.0% | 33.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4363025 | 2008.1.1.195 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_Eco47II | 0.57 | 48.0 | 3.35e-01 | 96.8% | 85.7% |
| 3783943 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.51 | 43.0 | 3.92e-01 | 100.0% | 81.1% |