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MW117965.1__QPB07923.1__X__00086

Bact-Vir

MW117965.1__QPB07923.1__X__00086

Identity

Accession:
MW117965 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-103
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 41.0 3.59e-01 77.8% 38.8%
3ly7A01 3.40.50.11830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 51.0 4.24e-01 80.0% 68.9%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 40.0 3.55e-01 80.0% 40.6%
2g8kA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 45.0 3.95e-01 74.4% 47.1%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.65 38.0 3.60e-01 97.8% 48.1%
2p18A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.64 44.0 3.08e-01 71.1% 86.6%
3r9pB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 43.0 3.48e-01 71.1% 36.7%
4o9dA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 50.0 3.22e-01 100.0% 19.9%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 50.0 3.40e-01 97.8% 25.9%
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 38.0 3.80e-01 100.0% 63.0%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 47.0 3.21e-01 97.8% 24.2%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 3.84e-01 100.0% 50.7%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.58 44.0 4.11e-01 81.1% 79.6%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.39e-01 100.0% 25.2%
3zh8C01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 36.0 3.31e-01 100.0% 47.8%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.58 50.0 3.36e-01 100.0% 25.8%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 50.0 3.40e-01 96.7% 28.0%
3zxjA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 50.0 3.51e-01 100.0% 37.5%
1zldA00 2.60.40.1920 Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA 0.56 42.0 4.04e-01 78.9% 84.3%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 35.0 3.49e-01 100.0% 59.8%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 3.77e-01 100.0% 59.9%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 50.0 3.36e-01 100.0% 26.7%
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.55 43.0 3.46e-01 98.9% 42.5%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 45.0 3.08e-01 100.0% 24.1%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 34.0 3.55e-01 100.0% 67.1%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.54 49.0 3.29e-01 100.0% 27.8%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 48.0 3.18e-01 100.0% 24.9%
2z3zA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.54 48.0 3.14e-01 100.0% 32.6%
2rkuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 34.0 3.44e-01 100.0% 64.0%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.53 41.0 3.59e-01 83.3% 54.9%
5nfiB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 4.12e-01 100.0% 100.0%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 45.0 3.06e-01 97.8% 25.6%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.52 46.0 4.03e-01 97.8% 93.9%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 33.0 3.03e-01 98.9% 47.9%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.50 36.0 3.63e-01 77.8% 74.4%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3789628 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.72 50.0 3.35e-01 72.2% 22.4%
3793797 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.70 49.0 3.33e-01 73.3% 24.1%
4225063 3840.1.1.2 a+b two layers › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › PerB 0.68 53.0 5.03e-01 95.6% 70.0%
3628265 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 48.0 3.09e-01 75.6% 21.4%
3661053 5.1.5.132 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF7899 0.65 46.0 2.93e-01 74.4% 16.4%
3396717 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 38.0 3.77e-01 70.0% 54.7%
3790336 5.1.3.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_Rol-3 0.63 44.0 3.27e-01 73.3% 31.5%
5075835 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.62 43.0 3.81e-01 74.4% 49.2%
3303863 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.62 52.0 3.44e-01 100.0% 23.5%
4244660 5.1.4.564 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29788 0.62 50.0 3.47e-01 97.8% 26.9%
3856612 319.1.1.9 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DPCD 0.62 42.0 3.26e-01 100.0% 33.5%
3607433 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.41e-01 96.7% 20.4%
3830791 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 55.0 3.55e-01 100.0% 38.4%
3670270 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.61 50.0 3.50e-01 100.0% 28.8%
4961453 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.60 49.0 3.20e-01 100.0% 20.8%
3930592 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 50.0 3.40e-01 100.0% 25.8%
3374672 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.60 49.0 3.20e-01 100.0% 20.3%
3714545 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 53.0 3.50e-01 97.8% 29.3%
3627791 5.1.4.94 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 0.60 53.0 3.60e-01 100.0% 27.5%
4994722 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.60 47.0 3.11e-01 100.0% 20.8%
5078315 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 48.0 2.87e-01 96.7% 12.8%
3252223 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.37e-01 97.8% 23.6%
3809666 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 49.0 2.87e-01 100.0% 10.3%
3917776 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.58 47.0 3.24e-01 100.0% 25.5%
5036626 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 51.0 3.31e-01 100.0% 21.2%
3404972 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.10e-01 97.8% 17.8%
4025256 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 45.0 4.72e-01 93.3% 95.0%
3482374 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 3.12e-01 81.1% 32.7%
3628642 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 51.0 3.39e-01 97.8% 24.7%
3575714 5.1.4.329 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.58 51.0 3.31e-01 97.8% 22.6%
4100600 109.46.1.0 alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) 0.57 49.0 3.18e-01 100.0% 21.8%
3369627 5.1.4.226 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7899 0.57 45.0 2.94e-01 100.0% 18.1%
3709162 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 3.22e-01 100.0% 24.8%
3998600 5.1.2.46 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Beta-prop_IFT140_1st 0.57 48.0 4.11e-01 100.0% 57.6%
3820988 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.57 43.0 3.78e-01 81.1% 65.9%
5033931 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.43e-01 100.0% 27.2%
3954118 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.34e-01 97.8% 26.3%
None 0.57 52.0 3.36e-01 100.0% 23.6%
3520126 5.1.4.329 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.57 48.0 3.19e-01 100.0% 23.3%
3519898 5.1.4.262 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.56 49.0 3.48e-01 100.0% 32.1%
3999240 5.1.5.45 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.56 46.0 3.51e-01 100.0% 37.7%
None 0.56 48.0 2.84e-01 100.0% 12.1%
3781917 5.1.4.332 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 0.56 47.0 3.27e-01 100.0% 27.1%
3814061 5.1.3.265 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_FKB95 0.56 46.0 3.14e-01 97.8% 25.5%
3993651 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 46.0 3.33e-01 100.0% 30.7%
4048802 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.56 50.0 2.88e-01 100.0% 10.6%
3634325 5.1.4.244 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd 0.56 49.0 3.36e-01 100.0% 27.9%
3166679 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 49.0 3.27e-01 100.0% 38.4%
3702735 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 49.0 2.92e-01 100.0% 13.9%
3844416 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.55 49.0 3.23e-01 100.0% 23.6%
3611446 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 47.0 3.33e-01 97.8% 29.9%
3404508 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 47.0 3.19e-01 97.8% 25.7%
3958695 3484.1.1.2 a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 0.54 36.0 3.08e-01 80.0% 38.1%
4957585 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.54 48.0 3.24e-01 97.8% 26.6%
3586270 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 49.0 3.12e-01 100.0% 21.4%
3240085 5.1.4.270 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd 0.54 48.0 3.14e-01 100.0% 31.9%
4366777 5.1.5.205 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF27482 0.54 48.0 3.17e-01 100.0% 24.1%
3624476 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 46.0 2.88e-01 95.6% 63.0%
3860062 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.29e-01 100.0% 32.7%
3935989 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 48.0 3.20e-01 100.0% 24.9%
4981443 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.54 47.0 3.14e-01 100.0% 24.1%
3439608 5.1.4.219 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.54 48.0 3.13e-01 100.0% 22.7%
3719566 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 47.0 3.27e-01 97.8% 31.0%
3717304 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 47.0 3.29e-01 100.0% 32.9%
3213945 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.53 46.0 3.14e-01 100.0% 27.9%
4963562 5.1.5.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 0.52 41.0 2.80e-01 100.0% 22.0%
4969674 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 3.11e-01 100.0% 27.6%
3453350 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.51 43.0 3.86e-01 97.8% 88.9%
4444916 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 45.0 2.90e-01 95.6% 62.7%
3838251 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 46.0 3.20e-01 100.0% 32.4%