←Back to structures
MW117966.1__QPB08094.1__X__00046
Bact-VirMW117966.1__QPB08094.1__X__00046
Identity
- Accession:
- MW117966 ↗
- Kingdom:
- phage
Quality
60.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Scyllavirus›
Synechococcus_phage_S-H9-1
TaxID: 2783674
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-92_358-368
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07484.18 best | Collar | 57.4 | 1.50e-15 | 74.4% | 75.4% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xgfA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.86 | 48.0 | 5.89e-01 | 100.0% | 85.7% |
| 1ocyA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.86 | 56.0 | 6.00e-01 | 100.0% | 76.3% |
| 2kskA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.53 | 32.0 | 3.47e-01 | 100.0% | 71.8% |
| 6lcqA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.50 | 30.0 | 3.46e-01 | 100.0% | 90.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4784856 | 877.1.1.2 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar | 0.83 | 51.0 | 5.65e-01 | 94.2% | 77.9% |
| 1839976 | 877.1.1.3 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar,S_tail_recep_bd | 0.67 | 62.0 | 4.65e-01 | 100.0% | 90.9% |
| 3669451 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.51 | 31.0 | 3.56e-01 | 100.0% | 94.3% |
D2
medium
residues 261-328