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MW145136.1__QPB11245.1__X__00017
Bact-VirMW145136.1__QPB11245.1__X__00017
Identity
- Accession:
- MW145136 ↗
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autonotataviridae›
Jeruvirus›
Providencia_phage_PSTNGR1
TaxID: 2783542
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 446-522
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.54 | 43.0 | 3.73e-01 | 89.6% | 97.6% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 45.0 | 2.99e-01 | 97.4% | 43.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4849380 | 79.1.1.37 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › PF30765 | 0.76 | 53.0 | 4.13e-01 | 71.4% | 36.1% |
| 3281348 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.59 | 45.0 | 4.19e-01 | 83.1% | 89.0% |
| 3291683 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.56 | 43.0 | 4.08e-01 | 80.5% | 94.4% |
| 4232261 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.56 | 40.0 | 3.22e-01 | 76.6% | 67.9% |
| 3616330 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.56 | 47.0 | 3.97e-01 | 93.5% | 77.0% |
| 3998167 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.53 | 36.0 | 2.54e-01 | 70.1% | 56.8% |
| 3605262 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 37.0 | 3.30e-01 | 75.3% | 72.7% |
| 3577687 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 40.0 | 3.00e-01 | 84.4% | 63.1% |
| 3228098 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 36.0 | 3.30e-01 | 75.3% | 60.0% |
| 3506232 | 4099.1.1.20 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 | 0.51 | 40.0 | 3.06e-01 | 88.3% | 73.8% |
D2
medium
residues 537-631
Domain cluster:
rep: MW073017.1__QPB08539.1__X__00060__D1038-1127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13884.12 best | Peptidase_S74 | 55.2 | 9.70e-15 | 56.8% | 100.0% |