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MW147367.1__QPB08336.1__X__00059
Bact-VirMW147367.1__QPB08336.1__X__00059
Identity
- Accession:
- MW147367 ↗
- Kingdom:
- phage
Quality
64.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Yushanluvirus›
Synechococcus_phage_S-H9-2
TaxID: 2783669
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-97
Domain cluster:
rep: GU071095.1__ADO97499.1__SSM2_157__00155__D13-98
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 43.0 | 4.58e-01 | 78.7% | 84.0% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 32.0 | 3.77e-01 | 72.3% | 75.0% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.59 | 46.0 | 4.56e-01 | 92.6% | 79.2% |
| 3mw6B00 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.57 | 46.0 | 4.66e-01 | 100.0% | 89.4% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 44.0 | 4.48e-01 | 100.0% | 86.2% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 36.0 | 4.18e-01 | 81.9% | 96.8% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.54 | 37.0 | 4.02e-01 | 89.4% | 85.5% |
| 1tvzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 41.0 | 3.60e-01 | 96.8% | 52.4% |
| 2vklA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.53 | 36.0 | 3.97e-01 | 88.3% | 85.7% |
| 2w53B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 43.0 | 3.64e-01 | 92.6% | 71.7% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.53 | 38.0 | 3.39e-01 | 74.5% | 81.2% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.52 | 32.0 | 3.80e-01 | 83.0% | 100.0% |
| 4kwaB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 46.0 | 3.67e-01 | 100.0% | 69.3% |
| 1g8xA06 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 41.0 | 2.82e-01 | 86.2% | 31.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.68 | 48.0 | 5.21e-01 | 88.3% | 90.7% |
| 3236724 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 53.0 | 5.17e-01 | 95.7% | 82.9% |
| 3928565 | 1117.1.1.0 ↗ | alpha arrays › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain | 0.62 | 43.0 | 3.71e-01 | 87.2% | 45.3% |
| 4931685 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.60 | 40.0 | 3.49e-01 | 75.5% | 45.0% |
| 3976180 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 52.0 | 4.06e-01 | 100.0% | 80.0% |
| 3265877 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.58 | 39.0 | 4.40e-01 | 87.2% | 100.0% |
| 3327912 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 37.0 | 2.92e-01 | 97.9% | 33.8% |
| 4014471 | 101.1.17.30 ↗ | alpha arrays › HTH › HTH › FF domain › DUF4246_N | 0.53 | 39.0 | 3.44e-01 | 78.7% | 57.2% |
| 4617287 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.53 | 44.0 | 4.47e-01 | 97.9% | 95.6% |
| 3716897 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.52 | 35.0 | 3.91e-01 | 78.7% | 86.7% |