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MW147367.1__QPB08437.1__X__00160

Bact-Vir

MW147367.1__QPB08437.1__X__00160

Identity

Accession:
MW147367 ↗
Kingdom:
phage

Quality

52.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-98
PDB
D2 high residues 1038-1102
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.63 40.0 3.78e-01 83.1% 53.8%
1i99I02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 44.0 3.61e-01 83.1% 41.0%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 47.0 4.69e-01 81.5% 80.3%
2gsbA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 45.0 4.13e-01 76.9% 77.4%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 44.0 3.78e-01 76.9% 63.0%
7xoiD01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 38.0 3.24e-01 76.9% 39.3%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.60 40.0 3.98e-01 70.8% 65.2%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 49.0 3.81e-01 89.2% 92.9%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.60 43.0 3.76e-01 76.9% 53.0%
3ffzA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 49.0 3.73e-01 100.0% 78.1%
1ekzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 43.0 4.17e-01 81.5% 77.6%
5x7qA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.58 43.0 2.99e-01 81.5% 48.7%
2laeA00 3.30.310.170 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC 0.57 43.0 3.57e-01 81.5% 55.1%
2dx0A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 45.0 3.71e-01 84.6% 88.0%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 3.00e-01 90.8% 34.6%
2i1sA00 3.10.290.30 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like 0.56 40.0 2.98e-01 75.4% 44.9%
1sqiA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 47.0 3.53e-01 95.4% 89.2%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 43.0 3.73e-01 83.1% 65.4%
1i1iP02 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.56 45.0 3.54e-01 90.8% 68.2%
1xa6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 42.0 3.64e-01 81.5% 58.7%
8bveB01 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.56 42.0 3.29e-01 92.3% 34.8%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 4.08e-01 84.6% 80.3%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.55 48.0 3.70e-01 100.0% 93.5%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 40.0 3.23e-01 75.4% 80.2%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 43.0 3.68e-01 83.1% 65.0%
3rmuA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 44.0 3.55e-01 90.8% 73.1%
2o95B00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 45.0 3.45e-01 100.0% 37.5%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.54 42.0 3.26e-01 89.2% 96.9%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 39.0 3.00e-01 76.9% 88.7%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 40.0 3.26e-01 86.2% 38.6%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 39.0 2.65e-01 78.5% 26.0%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 36.0 2.82e-01 70.8% 62.2%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 2.95e-01 87.7% 63.4%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 39.0 3.61e-01 81.5% 69.2%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 2.85e-01 100.0% 29.4%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 38.0 3.36e-01 75.4% 64.9%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.53 38.0 3.10e-01 76.9% 47.2%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 39.0 2.86e-01 81.5% 68.0%
2cn3A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.76e-01 90.8% 32.5%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 36.0 3.59e-01 72.3% 74.2%
1sp8C01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 42.0 3.18e-01 95.4% 34.9%
1yx2A02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.51 41.0 3.77e-01 89.2% 83.7%
4oagB02 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.51 35.0 2.60e-01 70.8% 47.8%
2yh9B00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.50 35.0 3.46e-01 72.3% 73.5%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 36.0 2.93e-01 76.9% 75.6%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4096825 331.3.1.8 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 0.66 46.0 3.81e-01 72.3% 54.8%
5063778 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 55.0 3.27e-01 90.8% 24.9%
1171964 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.65 47.0 4.92e-01 84.6% 86.2%
3386302 3186.1.1.1 a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook 0.64 41.0 3.79e-01 73.8% 50.6%
5082492 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 49.0 4.53e-01 84.6% 92.9%
3741960 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.62 50.0 3.16e-01 87.7% 37.6%
1140900 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.62 46.0 4.86e-01 81.5% 89.8%
3610987 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.61 43.0 3.50e-01 73.8% 75.2%
4124524 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.61 45.0 3.18e-01 78.5% 39.5%
4966955 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.61 45.0 4.47e-01 83.1% 74.3%
4474202 809.1.1.7 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF6392 0.61 47.0 4.43e-01 83.1% 67.9%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 45.0 3.48e-01 80.0% 68.0%
4964125 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.61 44.0 2.95e-01 78.5% 83.5%
3508531 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.60 41.0 4.45e-01 80.0% 92.0%
2529893 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.60 40.0 3.96e-01 70.8% 64.3%
3439330 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.60 42.0 3.43e-01 72.3% 92.4%
3323208 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.60 45.0 3.26e-01 81.5% 61.6%
3439826 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 45.0 3.49e-01 83.1% 40.0%
3401140 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.59 47.0 2.82e-01 86.2% 27.6%
2644388 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 45.0 3.66e-01 84.6% 80.8%
4559432 331.3.1.8 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 0.59 45.0 3.66e-01 83.1% 55.2%
4041632 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 40.0 3.07e-01 70.8% 39.3%
3206278 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.59 46.0 3.55e-01 87.7% 58.1%
5013360 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.58 36.0 3.20e-01 75.4% 41.1%
3436093 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 44.0 4.26e-01 83.1% 81.3%
4929919 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 44.0 3.93e-01 83.1% 97.9%
4031833 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 44.0 4.60e-01 83.1% 93.3%
4957480 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.57 45.0 2.81e-01 87.7% 22.4%
3729555 7520.1.1.1 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.57 41.0 3.19e-01 80.0% 92.7%
5054047 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 45.0 4.37e-01 89.2% 89.3%
3995669 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 50.0 3.32e-01 98.5% 27.4%
3266642 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 41.0 3.11e-01 76.9% 52.9%
4032017 2004.1.1.301 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.56 42.0 2.45e-01 81.5% 17.4%
3271779 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.16e-01 76.9% 57.9%
4952059 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.55 41.0 3.95e-01 84.6% 75.0%
3959660 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 42.0 3.37e-01 86.2% 45.5%
2802354 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.54 44.0 3.00e-01 92.3% 33.3%
3262159 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 37.0 3.05e-01 72.3% 86.9%
146717 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 38.0 3.35e-01 90.8% 48.0%
3188402 4099.1.1.31 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF26204 0.54 41.0 3.05e-01 87.7% 41.0%
4959982 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.54 42.0 3.06e-01 87.7% 46.3%
4506576 7026.1.1.5 beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.54 41.0 2.74e-01 87.7% 43.1%
3268229 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.67e-01 89.2% 76.2%
3380327 5.1.10.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › WD40_RFWD3 0.53 44.0 3.84e-01 92.3% 89.0%
4957866 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.53 38.0 2.63e-01 75.4% 22.0%
3955267 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.53 42.0 3.47e-01 93.8% 59.0%
3952792 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 41.0 3.34e-01 93.8% 52.0%
4144799 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.52 36.0 3.52e-01 70.8% 85.7%
3486056 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 43.0 3.47e-01 100.0% 61.6%
4619221 5.1.3.136 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DPPIV_N, PD40 0.52 42.0 2.85e-01 86.2% 41.5%
3486642 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.52 44.0 3.12e-01 96.9% 63.3%
3387871 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.52 40.0 3.36e-01 84.6% 67.8%
3885876 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 37.0 2.54e-01 78.5% 26.9%
3239884 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.52 38.0 3.36e-01 83.1% 69.5%
3259937 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.52 39.0 3.13e-01 83.1% 60.7%
3631382 2003.1.3.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase 0.52 45.0 2.89e-01 96.9% 91.4%
5055106 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 37.0 2.67e-01 75.4% 72.2%
3165101 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.51 41.0 2.81e-01 98.5% 22.7%
3739908 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 37.0 2.83e-01 81.5% 62.3%
4879215 3270.1.1.1 a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.50 34.0 3.09e-01 72.3% 48.4%
D3 medium residues 180-197_231-413
PDB
D4 medium residues 810-963
PDB