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MW218148.1__QPI16946.1__X__00027
Bact-VirMW218148.1__QPI16946.1__X__00027
Identity
- Accession:
- MW218148 ↗
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Taxonomy
TaxID: 2785444
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-74
Domain cluster:
rep: MG592671.1__AUS02962.1__NVP2275O_381__00381__D191-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05265.21 best | DUF723 | 34.1 | 3.90e-08 | 94.0% | 76.2% |
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qe0A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 51.0 | 4.70e-01 | 85.1% | 84.6% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 52.0 | 4.67e-01 | 86.6% | 81.9% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 54.0 | 4.55e-01 | 94.0% | 75.2% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 51.0 | 4.54e-01 | 86.6% | 82.8% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 50.0 | 4.40e-01 | 85.1% | 75.2% |
| 6ya6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 51.0 | 4.60e-01 | 89.6% | 98.0% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 56.0 | 4.62e-01 | 100.0% | 72.4% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 53.0 | 4.48e-01 | 92.5% | 69.0% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 46.0 | 2.88e-01 | 77.6% | 40.5% |
| 2hw6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 44.0 | 4.07e-01 | 73.1% | 96.6% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 52.0 | 4.66e-01 | 92.5% | 82.7% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 55.0 | 4.79e-01 | 98.5% | 76.0% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 42.0 | 4.35e-01 | 70.1% | 81.5% |
| 4fg9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 44.0 | 4.21e-01 | 74.6% | 96.2% |
| 4cy8A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 43.0 | 2.94e-01 | 73.1% | 57.7% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 53.0 | 4.76e-01 | 98.5% | 81.6% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.61 | 40.0 | 4.39e-01 | 71.6% | 83.3% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 44.0 | 3.67e-01 | 77.6% | 91.1% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.61 | 53.0 | 4.60e-01 | 100.0% | 85.0% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 44.0 | 2.73e-01 | 77.6% | 39.1% |
| 4g3cA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 43.0 | 3.49e-01 | 74.6% | 74.6% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.60 | 43.0 | 2.71e-01 | 76.1% | 60.9% |
| 3k30A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 43.0 | 3.43e-01 | 76.1% | 96.2% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.59 | 37.0 | 4.01e-01 | 71.6% | 75.4% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.58 | 40.0 | 4.41e-01 | 77.6% | 90.4% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 39.0 | 4.58e-01 | 71.6% | 100.0% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 42.0 | 4.57e-01 | 79.1% | 96.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 42.0 | 4.10e-01 | 80.6% | 69.9% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 4.43e-01 | 71.6% | 95.9% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.31e-01 | 71.6% | 92.5% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 4.39e-01 | 79.1% | 96.2% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 39.0 | 3.72e-01 | 71.6% | 79.5% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 40.0 | 3.83e-01 | 76.1% | 77.8% |
| 2vpjA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.57 | 43.0 | 2.89e-01 | 85.1% | 28.0% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 38.0 | 4.03e-01 | 71.6% | 90.0% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 3.86e-01 | 70.1% | 81.2% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.55 | 38.0 | 4.24e-01 | 76.1% | 96.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 38.0 | 3.61e-01 | 71.6% | 68.4% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 41.0 | 3.37e-01 | 82.1% | 43.5% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.27e-01 | 77.6% | 96.1% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 41.0 | 3.91e-01 | 80.6% | 75.0% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 3.74e-01 | 100.0% | 73.0% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 40.0 | 3.88e-01 | 77.6% | 85.1% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.55 | 41.0 | 4.19e-01 | 85.1% | 90.9% |
| 4qbnA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 42.0 | 3.89e-01 | 89.6% | 96.8% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 36.0 | 3.73e-01 | 70.1% | 81.2% |
| 5yy8A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.54 | 41.0 | 2.80e-01 | 85.1% | 28.3% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 40.0 | 3.85e-01 | 83.6% | 88.6% |
| 3e19B01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.54 | 40.0 | 4.11e-01 | 80.6% | 93.8% |
| 2evrA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 41.0 | 4.04e-01 | 83.6% | 87.8% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 40.0 | 3.87e-01 | 82.1% | 78.7% |
| 1xfdA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.53 | 42.0 | 2.59e-01 | 91.0% | 17.2% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 36.0 | 3.81e-01 | 71.6% | 94.6% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 3.25e-01 | 100.0% | 70.2% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.60e-01 | 77.6% | 63.7% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 35.0 | 3.15e-01 | 74.6% | 47.4% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.38e-01 | 100.0% | 44.3% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.69e-01 | 91.0% | 23.5% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 35.0 | 3.76e-01 | 71.6% | 89.8% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 37.0 | 3.91e-01 | 76.1% | 89.8% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 35.0 | 3.73e-01 | 71.6% | 89.7% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 4.05e-01 | 83.6% | 98.5% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 43.0 | 3.41e-01 | 100.0% | 93.3% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 38.0 | 3.50e-01 | 83.6% | 89.0% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 36.0 | 3.72e-01 | 76.1% | 90.2% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4489788 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.73 | 62.0 | 5.43e-01 | 94.0% | 87.0% |
| 4122293 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.72 | 60.0 | 5.26e-01 | 92.5% | 86.0% |
| 4683191 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.71 | 59.0 | 5.18e-01 | 92.5% | 86.0% |
| 4439755 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.71 | 60.0 | 5.27e-01 | 95.5% | 88.0% |
| 3262212 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.71 | 55.0 | 4.73e-01 | 86.6% | 70.9% |
| 4928458 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 55.0 | 4.97e-01 | 85.1% | 85.6% |
| 4474374 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 55.0 | 4.92e-01 | 86.6% | 81.1% |
| 4415964 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.68 | 54.0 | 4.77e-01 | 86.6% | 79.8% |
| 4873705 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.68 | 47.0 | 3.84e-01 | 73.1% | 97.7% |
| 4163844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.68 | 53.0 | 4.79e-01 | 86.6% | 82.1% |
| 4091319 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.68 | 52.0 | 4.60e-01 | 83.6% | 75.5% |
| 4969848 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.67 | 54.0 | 4.52e-01 | 89.6% | 66.7% |
| 4455003 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 52.0 | 4.78e-01 | 85.1% | 85.6% |
| 4279058 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 53.0 | 4.83e-01 | 86.6% | 84.4% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.67 | 51.0 | 4.72e-01 | 85.1% | 85.2% |
| 4994848 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 57.0 | 4.95e-01 | 97.0% | 83.8% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 5.11e-01 | 82.1% | 90.9% |
| 4640921 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 52.0 | 4.67e-01 | 86.6% | 80.6% |
| 4136172 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 54.0 | 4.83e-01 | 92.5% | 86.3% |
| 4477176 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.65 | 51.0 | 4.77e-01 | 86.6% | 81.2% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 45.0 | 4.95e-01 | 80.6% | 89.1% |
| 4547689 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.65 | 51.0 | 4.66e-01 | 86.6% | 70.0% |
| 4176748 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 55.0 | 4.58e-01 | 100.0% | 73.6% |
| 5060760 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.64 | 47.0 | 4.75e-01 | 83.6% | 80.0% |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 4.73e-01 | 79.1% | 87.3% |
| 4240279 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 55.0 | 4.67e-01 | 100.0% | 76.5% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.73e-01 | 79.1% | 87.3% |
| 4528204 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 55.0 | 4.83e-01 | 98.5% | 83.0% |
| 4129217 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 54.0 | 4.80e-01 | 98.5% | 83.8% |
| 4177792 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 54.0 | 4.68e-01 | 100.0% | 80.0% |
| 4286008 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 54.0 | 4.77e-01 | 98.5% | 80.0% |
| 4947995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 44.0 | 4.80e-01 | 80.6% | 90.9% |
| 3507364 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 53.0 | 4.61e-01 | 100.0% | 81.8% |
| 5033313 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 54.0 | 4.79e-01 | 100.0% | 80.8% |
| 5036878 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 53.0 | 4.57e-01 | 100.0% | 78.0% |
| 4110889 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 53.0 | 4.58e-01 | 98.5% | 81.0% |
| 3180655 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 51.0 | 4.05e-01 | 98.5% | 72.0% |
| 5044374 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 41.0 | 4.44e-01 | 70.1% | 90.9% |
| 4336817 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 51.0 | 4.62e-01 | 98.5% | 84.2% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.63e-01 | 83.6% | 93.8% |
| 4168836 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 39.0 | 3.92e-01 | 70.1% | 84.3% |
| 4997768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 41.0 | 4.52e-01 | 74.6% | 90.9% |
| 4678731 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 39.0 | 4.03e-01 | 70.1% | 80.0% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 43.0 | 4.02e-01 | 80.6% | 63.5% |
| 3902975 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 43.0 | 4.47e-01 | 79.1% | 100.0% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 44.0 | 3.97e-01 | 82.1% | 61.1% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 44.0 | 3.98e-01 | 82.1% | 61.1% |
| 3671396 | 4.1.1.316 ↗ | beta barrels › SH3 › SH3 › SH3 › PUB62-63_C | 0.57 | 41.0 | 4.05e-01 | 76.1% | 78.1% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 43.0 | 3.78e-01 | 82.1% | 87.0% |
| 4059146 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.56 | 38.0 | 3.88e-01 | 70.1% | 80.0% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.56 | 42.0 | 4.12e-01 | 80.6% | 77.3% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.56 | 41.0 | 4.20e-01 | 80.6% | 80.0% |
| 3317787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 38.0 | 4.26e-01 | 71.6% | 96.0% |
| 3185844 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 41.0 | 4.06e-01 | 80.6% | 90.0% |
| 3172618 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.55 | 47.0 | 4.18e-01 | 98.5% | 74.0% |
| 4252940 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.55 | 39.0 | 3.98e-01 | 74.6% | 80.0% |
| 3515415 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 43.0 | 2.42e-01 | 89.6% | 8.0% |
| 3222195 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 40.0 | 4.06e-01 | 77.6% | 92.3% |
| 3953025 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 39.0 | 3.73e-01 | 76.1% | 95.0% |
| 3731905 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 41.0 | 4.21e-01 | 82.1% | 100.0% |
| 4184764 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.53 | 39.0 | 3.96e-01 | 77.6% | 81.5% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.53 | 36.0 | 3.64e-01 | 70.1% | 83.1% |
| 4582456 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.53 | 37.0 | 3.67e-01 | 73.1% | 75.7% |
| 3849311 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 39.0 | 4.07e-01 | 77.6% | 95.0% |
| 3930651 | 3246.1.1.4 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_3 | 0.52 | 36.0 | 3.27e-01 | 73.1% | 51.6% |
| 4929009 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 36.0 | 3.04e-01 | 74.6% | 43.1% |
| 3398298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 36.0 | 3.45e-01 | 74.6% | 85.0% |
| 3580264 | 366.1.1.8 ↗ | few secondary structure elements › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › ADAMTS_CR_3 | 0.51 | 35.0 | 3.11e-01 | 71.6% | 53.0% |
| 3549045 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 38.0 | 3.35e-01 | 85.1% | 69.1% |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 38.0 | 3.33e-01 | 85.1% | 69.1% |
D2
high
residues 90-145
Domain cluster:
rep: OR921208.1__WRQ11876.1__X__00049__D8-51
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05265.21 best | DUF723 | 33.9 | 4.50e-08 | 92.9% | 76.2% |
D3
high
residues 149-228
Domain cluster:
rep: MW218148.1__QPI16946.1__X__00027__D239-305
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 49.0 | 4.63e-01 | 90.0% | 86.6% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.59 | 49.0 | 4.52e-01 | 92.5% | 81.7% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 49.0 | 4.36e-01 | 95.0% | 78.5% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 48.0 | 4.23e-01 | 92.5% | 74.0% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 46.0 | 4.38e-01 | 88.7% | 82.7% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 50.0 | 4.54e-01 | 96.2% | 86.9% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 34.0 | 4.12e-01 | 71.2% | 95.9% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 46.0 | 4.16e-01 | 90.0% | 72.6% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.56 | 47.0 | 4.43e-01 | 92.5% | 82.7% |
| 6p2lA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 2.93e-01 | 88.7% | 22.3% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.56 | 34.0 | 4.14e-01 | 71.2% | 96.1% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 40.0 | 2.58e-01 | 76.2% | 39.9% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 36.0 | 4.19e-01 | 76.2% | 96.4% |
| 1xfdA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.56 | 44.0 | 2.79e-01 | 88.7% | 19.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 3.62e-01 | 73.8% | 68.5% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.56 | 45.0 | 4.19e-01 | 88.7% | 84.8% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 35.0 | 3.88e-01 | 70.0% | 80.0% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 35.0 | 3.73e-01 | 76.2% | 75.8% |
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.55 | 37.0 | 3.47e-01 | 78.8% | 54.9% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 45.0 | 4.32e-01 | 91.3% | 87.2% |
| 1qe0A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 42.0 | 4.03e-01 | 82.5% | 86.8% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.19e-01 | 81.2% | 90.5% |
| 2vd5B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 40.0 | 3.07e-01 | 77.5% | 67.4% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 35.0 | 3.63e-01 | 81.2% | 74.0% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.52 | 34.0 | 2.61e-01 | 76.2% | 27.7% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.71e-01 | 75.0% | 73.8% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.52 | 34.0 | 3.00e-01 | 70.0% | 45.0% |
| 3r4rA02 | 2.60.40.2590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.41e-01 | 82.5% | 89.6% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.69e-01 | 98.8% | 78.7% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.16e-01 | 76.2% | 54.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 34.0 | 3.84e-01 | 93.8% | 100.0% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4122293 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 51.0 | 4.76e-01 | 86.3% | 87.0% |
| 4439755 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 53.0 | 4.95e-01 | 90.0% | 89.0% |
| 4683191 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 49.0 | 4.63e-01 | 86.3% | 87.0% |
| 4163844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 47.0 | 4.50e-01 | 81.2% | 81.1% |
| 4994848 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 52.0 | 4.77e-01 | 91.3% | 85.7% |
| 3588167 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 51.0 | 4.75e-01 | 93.8% | 85.7% |
| 4489788 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 51.0 | 4.74e-01 | 91.3% | 86.0% |
| 4359317 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 47.0 | 4.47e-01 | 82.5% | 82.1% |
| 4640921 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 47.0 | 4.49e-01 | 82.5% | 81.7% |
| 3393174 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 49.0 | 4.32e-01 | 87.5% | 76.5% |
| 4477176 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 46.0 | 4.58e-01 | 82.5% | 83.5% |
| 4112874 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 52.0 | 4.53e-01 | 97.5% | 70.4% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 45.0 | 4.44e-01 | 82.5% | 87.5% |
| 3581354 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 48.0 | 4.11e-01 | 90.0% | 70.4% |
| 3262212 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.59 | 49.0 | 4.42e-01 | 90.0% | 73.6% |
| 4129217 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 50.0 | 4.65e-01 | 92.5% | 85.9% |
| 4969964 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 49.0 | 4.66e-01 | 91.3% | 90.5% |
| 4415964 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 48.0 | 4.45e-01 | 87.5% | 81.8% |
| 4157435 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 50.0 | 4.64e-01 | 92.5% | 85.0% |
| 3314214 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.59 | 48.0 | 4.41e-01 | 92.5% | 82.7% |
| 4562754 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 49.0 | 4.58e-01 | 92.5% | 86.0% |
| 5033313 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 47.0 | 4.42e-01 | 88.7% | 84.8% |
| 4149625 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 47.0 | 4.40e-01 | 87.5% | 79.8% |
| 4928458 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 47.0 | 4.60e-01 | 88.7% | 86.7% |
| 4336817 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 49.0 | 4.63e-01 | 92.5% | 89.5% |
| 4982300 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 46.0 | 4.48e-01 | 87.5% | 88.9% |
| 4441518 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 48.0 | 4.58e-01 | 92.5% | 89.5% |
| 4048026 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 47.0 | 4.52e-01 | 91.3% | 88.4% |
| 3785991 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.58 | 49.0 | 4.54e-01 | 97.5% | 97.1% |
| 4650543 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 46.0 | 4.40e-01 | 87.5% | 84.9% |
| 3077774 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 49.0 | 4.22e-01 | 97.5% | 71.6% |
| 5055310 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 47.0 | 4.52e-01 | 88.7% | 85.6% |
| 4177792 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 48.0 | 4.42e-01 | 96.2% | 83.6% |
| 4286008 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 47.0 | 4.39e-01 | 91.3% | 84.0% |
| 3180655 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 47.0 | 3.91e-01 | 92.5% | 74.7% |
| 5080553 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 47.0 | 4.47e-01 | 92.5% | 86.7% |
| 4977821 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 46.0 | 4.36e-01 | 91.3% | 86.0% |
| 4607181 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 46.0 | 4.40e-01 | 88.7% | 83.2% |
| 4228426 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 48.0 | 4.49e-01 | 93.8% | 87.0% |
| 5036878 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 49.0 | 4.43e-01 | 96.2% | 81.7% |
| 4969848 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.57 | 48.0 | 4.23e-01 | 95.0% | 69.2% |
| 4082349 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 48.0 | 4.37e-01 | 96.2% | 83.6% |
| 5039886 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 45.0 | 4.38e-01 | 87.5% | 88.9% |
| 4956219 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 49.0 | 4.28e-01 | 96.2% | 75.8% |
| 4136172 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 46.0 | 4.36e-01 | 88.7% | 86.3% |
| 3507364 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 47.0 | 4.35e-01 | 97.5% | 86.4% |
| 4643994 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 45.0 | 4.30e-01 | 87.5% | 83.0% |
| 4069569 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 47.0 | 4.44e-01 | 92.5% | 81.8% |
| 4317320 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 46.0 | 4.38e-01 | 92.5% | 85.7% |
| 3197762 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.56 | 47.0 | 4.26e-01 | 96.2% | 77.4% |
| 4510149 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 46.0 | 4.30e-01 | 92.5% | 87.0% |
| 4122366 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 48.0 | 4.20e-01 | 96.2% | 75.0% |
| 3502952 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.55 | 45.0 | 4.25e-01 | 92.5% | 92.0% |
| 4265378 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 46.0 | 4.29e-01 | 95.0% | 83.5% |
| 4370920 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 48.0 | 4.47e-01 | 97.5% | 84.0% |
| 5061701 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 45.0 | 4.30e-01 | 95.0% | 87.0% |
| 4384939 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 44.0 | 4.21e-01 | 88.7% | 84.0% |
| 3970048 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.55 | 40.0 | 4.05e-01 | 81.2% | 80.8% |
| 4375036 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 44.0 | 4.16e-01 | 91.3% | 85.0% |
| 3744042 | 216.1.1.27 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › HGTP_anticodon2 | 0.55 | 46.0 | 3.85e-01 | 95.0% | 62.1% |
| 4121236 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 43.0 | 4.19e-01 | 87.5% | 89.9% |
| 4110889 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 45.0 | 4.18e-01 | 92.5% | 82.9% |
| 5079765 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.54 | 47.0 | 4.31e-01 | 96.2% | 81.0% |
| 4940298 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.54 | 44.0 | 4.26e-01 | 91.3% | 88.9% |
| 4297095 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.53 | 43.0 | 4.01e-01 | 91.3% | 80.0% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 39.0 | 3.63e-01 | 81.2% | 60.0% |
| 3175837 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 3.63e-01 | 93.8% | 84.0% |
| 4058764 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 39.0 | 4.05e-01 | 90.0% | 86.3% |
| 3172618 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 42.0 | 3.94e-01 | 93.8% | 71.0% |
| 5050109 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.52 | 40.0 | 3.98e-01 | 85.0% | 81.2% |
| 4582456 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.52 | 32.0 | 3.44e-01 | 71.2% | 71.4% |
| 4286529 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.51 | 39.0 | 3.81e-01 | 83.7% | 87.8% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.51 | 38.0 | 3.36e-01 | 80.0% | 54.8% |
| 3240406 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.51 | 35.0 | 3.08e-01 | 81.2% | 48.7% |
| 3931161 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 38.0 | 3.44e-01 | 82.5% | 73.0% |
D4
high
residues 239-305
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05265.21 best | DUF723 | 32.2 | 1.50e-07 | 94.0% | 92.1% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.63 | 47.0 | 3.01e-01 | 82.1% | 45.8% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 43.0 | 2.65e-01 | 74.6% | 40.5% |
| 6ywnA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 38.0 | 3.24e-01 | 70.1% | 38.9% |
| 1fl2A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 42.0 | 3.47e-01 | 74.6% | 84.7% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 41.0 | 4.13e-01 | 83.6% | 74.2% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 50.0 | 4.03e-01 | 98.5% | 73.8% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.59 | 50.0 | 4.50e-01 | 98.5% | 81.6% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.59 | 48.0 | 3.12e-01 | 91.0% | 95.8% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.59 | 47.0 | 4.67e-01 | 89.6% | 98.6% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 41.0 | 3.41e-01 | 74.6% | 84.6% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 39.0 | 3.39e-01 | 71.6% | 91.0% |
| 5cqfA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 40.0 | 2.52e-01 | 74.6% | 40.6% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 38.0 | 3.67e-01 | 70.1% | 69.6% |
| 3lzwA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 39.0 | 3.30e-01 | 74.6% | 85.7% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 3.67e-01 | 92.5% | 90.3% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 40.0 | 4.35e-01 | 80.6% | 96.4% |
| 4qdiA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.55 | 42.0 | 3.04e-01 | 88.1% | 32.8% |
| 8f5dA05 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.55 | 43.0 | 3.11e-01 | 91.0% | 50.2% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.57e-01 | 71.6% | 63.7% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 42.0 | 2.81e-01 | 89.6% | 34.7% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.54 | 42.0 | 2.76e-01 | 88.1% | 23.1% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.84e-01 | 91.0% | 25.3% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.54 | 36.0 | 2.62e-01 | 70.1% | 24.6% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.67e-01 | 100.0% | 79.4% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 4.05e-01 | 89.6% | 81.7% |
| 5l37C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.53 | 36.0 | 3.33e-01 | 70.1% | 84.9% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 42.0 | 2.74e-01 | 91.0% | 19.7% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 41.0 | 3.78e-01 | 89.6% | 96.8% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 41.0 | 3.80e-01 | 94.0% | 78.4% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 39.0 | 3.79e-01 | 85.1% | 84.6% |
| 3q6kA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 41.0 | 2.64e-01 | 91.0% | 21.3% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 40.0 | 3.70e-01 | 89.6% | 70.3% |
| 1zy9A03 | 2.60.40.2760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 32.0 | 3.71e-01 | 71.6% | 97.7% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 41.0 | 2.70e-01 | 91.0% | 40.9% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.51 | 36.0 | 3.85e-01 | 73.1% | 96.4% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 40.0 | 3.50e-01 | 91.0% | 90.9% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.50 | 39.0 | 3.93e-01 | 89.6% | 89.4% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.50 | 40.0 | 2.68e-01 | 89.6% | 28.6% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 41.0 | 3.34e-01 | 100.0% | 92.7% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4873705 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.64 | 43.0 | 3.50e-01 | 70.1% | 98.5% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.63 | 44.0 | 3.72e-01 | 73.1% | 53.9% |
| 1349791 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.61 | 43.0 | 3.14e-01 | 73.1% | 89.4% |
| 1503826 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.61 | 43.0 | 3.19e-01 | 74.6% | 93.8% |
| 5032233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 47.0 | 3.95e-01 | 85.1% | 81.7% |
| 3281458 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.60 | 42.0 | 2.60e-01 | 74.6% | 40.7% |
| 5074243 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 50.0 | 4.55e-01 | 97.0% | 80.0% |
| 3973131 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.60 | 42.0 | 2.60e-01 | 74.6% | 40.7% |
| 4497830 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.60 | 42.0 | 3.05e-01 | 74.6% | 89.2% |
| 3281618 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.60 | 43.0 | 3.83e-01 | 77.6% | 74.0% |
| 3969301 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 40.0 | 3.29e-01 | 70.1% | 83.8% |
| 4955327 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 43.0 | 4.55e-01 | 83.6% | 96.4% |
| 3774301 | 316.1.1.64 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › TUTase, MTPAP-like_central | 0.59 | 38.0 | 2.50e-01 | 71.6% | 13.7% |
| None | — | 0.59 | 40.0 | 2.56e-01 | 70.1% | 29.9% | |
| 1688900 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.59 | 40.0 | 3.01e-01 | 70.1% | 96.6% |
| 4958447 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.59 | 40.0 | 3.04e-01 | 70.1% | 64.2% |
| 4562701 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.59 | 41.0 | 3.41e-01 | 74.6% | 84.6% |
| 3953025 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 40.0 | 3.77e-01 | 70.1% | 71.2% |
| 3598363 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 41.0 | 2.64e-01 | 74.6% | 33.5% |
| 4587696 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.58 | 41.0 | 3.62e-01 | 74.6% | 63.0% |
| 4163844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 48.0 | 4.34e-01 | 94.0% | 81.1% |
| 3737835 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.58 | 46.0 | 4.10e-01 | 91.0% | 97.0% |
| 2391944 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.58 | 45.0 | 4.17e-01 | 86.6% | 96.6% |
| 4935198 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.58 | 40.0 | 3.11e-01 | 74.6% | 95.0% |
| 4287237 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.57 | 40.0 | 3.36e-01 | 74.6% | 92.0% |
| 3743204 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.57 | 39.0 | 3.02e-01 | 71.6% | 51.6% |
| 3952778 | 101.1.2.574 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26520 | 0.57 | 43.0 | 4.03e-01 | 83.6% | 91.8% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.57 | 41.0 | 4.20e-01 | 76.1% | 78.5% |
| 3606779 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 40.0 | 3.17e-01 | 76.1% | 87.1% |
| 3894031 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.55 | 43.0 | 4.10e-01 | 89.6% | 78.8% |
| 5014374 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.55 | 40.0 | 2.41e-01 | 77.6% | 14.4% |
| 4203984 | 101.8.1.1 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f,Anticodon_2 | 0.55 | 40.0 | 2.41e-01 | 77.6% | 14.4% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 44.0 | 4.26e-01 | 91.0% | 93.3% |
| 3928939 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.54 | 43.0 | 2.88e-01 | 91.0% | 31.9% |
| 3411657 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.54 | 40.0 | 2.73e-01 | 83.6% | 86.7% |
| 5040072 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.54 | 38.0 | 2.82e-01 | 74.6% | 57.4% |
| 3510695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 42.0 | 4.09e-01 | 91.0% | 80.0% |
| 4243492 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.54 | 41.0 | 4.22e-01 | 94.0% | 95.0% |
| 3509582 | 375.1.1.184 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TOP3B | 0.54 | 44.0 | 3.36e-01 | 97.0% | 71.4% |
| 5003654 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 3.74e-01 | 76.1% | 68.0% |
| 3701501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.87e-01 | 74.6% | 87.7% |
| 3872866 | 5.1.5.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_LRRK2 | 0.53 | 42.0 | 2.73e-01 | 91.0% | 23.6% |
| 3213121 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.53 | 41.0 | 3.99e-01 | 85.1% | 88.0% |
| 4948153 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 41.0 | 4.07e-01 | 88.1% | 85.7% |
| 4966836 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 4.03e-01 | 79.1% | 98.2% |
| 3408623 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.52 | 42.0 | 3.08e-01 | 89.6% | 51.1% |
| 4927267 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.52 | 35.0 | 3.99e-01 | 79.1% | 100.0% |
| 4457428 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.52 | 41.0 | 3.51e-01 | 86.6% | 74.5% |
| 3911301 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 40.0 | 3.82e-01 | 89.6% | 74.1% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 39.0 | 4.05e-01 | 83.6% | 95.0% |
| 3964101 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.52 | 38.0 | 3.97e-01 | 88.1% | 93.3% |
| 3512466 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 37.0 | 3.12e-01 | 79.1% | 48.8% |
| 5032137 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.51 | 41.0 | 4.07e-01 | 92.5% | 87.1% |
| 3932430 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.51 | 40.0 | 4.02e-01 | 92.5% | 87.1% |
| 4030472 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.50 | 41.0 | 3.00e-01 | 100.0% | 32.1% |
| 3259877 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.50 | 40.0 | 2.90e-01 | 91.0% | 48.3% |
| 3721850 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.50 | 40.0 | 2.93e-01 | 92.5% | 91.0% |
D5
high
residues 309-416
Domain cluster:
rep: hypothetical_protein_MIMI_gp0214__YP_003986688__Acanthamoeba_polyphaga_mimivirus__212035__D20-95
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 46.0 | 4.63e-01 | 86.1% | 77.5% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 33.0 | 3.97e-01 | 72.2% | 87.7% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 34.0 | 4.00e-01 | 79.6% | 90.4% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 31.0 | 3.86e-01 | 89.8% | 92.4% |
| 2hzpA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 48.0 | 4.13e-01 | 100.0% | 98.3% |
| 1jcfA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 34.0 | 3.87e-01 | 92.6% | 89.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.96e-01 | 76.9% | 98.6% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 31.0 | 3.79e-01 | 73.1% | 98.5% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 35.0 | 3.24e-01 | 70.4% | 83.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 29.0 | 3.64e-01 | 86.1% | 96.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004672 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.63 | 46.0 | 4.49e-01 | 83.3% | 69.2% |
| 4427477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 3.99e-01 | 73.1% | 75.8% |
| 4135259 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.55 | 31.0 | 3.84e-01 | 92.6% | 92.3% |
| 4112874 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.54 | 40.0 | 3.80e-01 | 75.9% | 80.8% |
| 3940730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 3.70e-01 | 73.1% | 75.8% |
| 3401325 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 28.0 | 3.42e-01 | 95.4% | 83.1% |
| 5058311 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.51 | 32.0 | 2.82e-01 | 90.7% | 40.6% |
| 3783152 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.51 | 44.0 | 3.26e-01 | 100.0% | 64.8% |
D6
high
residues 437-533
D7
high
residues 542-682