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MW218148.1__QPI17025.1__X__00106

Bact-Vir

MW218148.1__QPI17025.1__X__00106

Identity

Accession:
MW218148 ↗
Kingdom:
phage

Quality

87.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-91
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f8lB00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.75 59.0 4.72e-01 83.0% 86.8%
2p19A01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.75 54.0 4.73e-01 76.1% 100.0%
2nwiB00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.73 56.0 4.63e-01 81.8% 90.8%
3qooA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.73 52.0 4.45e-01 73.9% 81.3%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.72 53.0 3.62e-01 77.3% 44.7%
4hzoA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 58.0 3.94e-01 86.4% 42.5%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 49.0 4.21e-01 71.6% 71.7%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.71 64.0 4.37e-01 100.0% 87.4%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 49.0 3.95e-01 71.6% 60.6%
2cwzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 51.0 4.34e-01 73.9% 81.0%
1q4tA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 49.0 4.16e-01 71.6% 71.8%
3lw3B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.70 49.0 4.15e-01 71.6% 70.1%
2ooiA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.69 54.0 4.47e-01 84.1% 90.9%
1ixlA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 48.0 4.18e-01 71.6% 75.2%
4w78F00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 48.0 4.29e-01 73.9% 95.3%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 44.0 3.67e-01 78.4% 38.9%
5bp3B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.68 51.0 3.50e-01 78.4% 90.8%
3kuvB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 47.0 4.12e-01 72.7% 86.5%
3cnvA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.67 53.0 4.47e-01 87.5% 93.5%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 47.0 3.91e-01 73.9% 76.9%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 48.0 3.49e-01 75.0% 43.1%
2gf6A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 46.0 4.04e-01 71.6% 82.0%
3bwgA02 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.67 52.0 4.31e-01 84.1% 88.5%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 45.0 3.92e-01 70.5% 73.7%
3eetA02 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.66 55.0 4.53e-01 94.3% 89.9%
5uc6A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 51.0 4.27e-01 84.1% 87.4%
3l5zA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.65 48.0 4.19e-01 78.4% 99.3%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 47.0 4.38e-01 78.4% 72.2%
6grrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 50.0 4.83e-01 93.2% 75.2%
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.62 47.0 3.77e-01 81.8% 72.2%
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.61 47.0 3.73e-01 81.8% 70.9%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.61 46.0 4.16e-01 79.5% 96.6%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 41.0 3.57e-01 70.5% 78.6%
1ksiA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 4.72e-01 92.0% 79.2%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 4.15e-01 80.7% 63.8%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.60 50.0 4.04e-01 93.2% 48.9%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 45.0 3.98e-01 83.0% 100.0%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 51.0 3.38e-01 100.0% 34.1%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.57 44.0 3.85e-01 83.0% 66.2%
1f3lA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.56 42.0 3.40e-01 79.5% 78.2%
2pmqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 42.0 3.72e-01 80.7% 91.5%
3r0qA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.55 42.0 3.20e-01 80.7% 74.0%
3a46A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.55 50.0 4.28e-01 97.7% 81.6%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 4.21e-01 92.0% 84.2%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 47.0 4.25e-01 94.3% 91.7%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 43.0 3.07e-01 89.8% 83.8%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 44.0 2.93e-01 92.0% 23.6%
1qfxA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.53 46.0 3.34e-01 97.7% 77.5%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.52 46.0 3.65e-01 100.0% 48.5%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031476 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.81 57.0 5.38e-01 90.9% 62.1%
4611906 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.72 50.0 4.27e-01 71.6% 82.9%
3110784 4056.1.1.4 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con 0.72 46.0 4.13e-01 70.5% 47.5%
4033014 814.1.1.3 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA 0.72 59.0 4.78e-01 88.6% 90.3%
3987685 814.1.1.3 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA 0.71 56.0 4.47e-01 84.1% 85.3%
4201712 243.3.1.37 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4901 0.70 45.0 5.13e-01 90.9% 89.2%
3446774 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.70 42.0 4.37e-01 80.7% 65.0%
3602202 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.70 49.0 3.78e-01 72.7% 53.2%
3942044 814.1.1.2 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase 0.69 53.0 4.33e-01 83.0% 78.2%
4188473 814.1.1.2 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase 0.69 52.0 4.24e-01 81.8% 84.7%
4301136 814.1.1.2 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase 0.69 53.0 4.33e-01 84.1% 80.0%
3421095 3521.1.1.4 a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › SWIM 0.68 43.0 4.33e-01 90.9% 62.2%
5009568 243.5.1.1 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 0.67 55.0 5.40e-01 92.0% 82.1%
4096980 243.5.1.6 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cyto_heme_lyase 0.66 58.0 5.17e-01 100.0% 80.8%
3247394 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.66 51.0 5.24e-01 90.9% 84.7%
3230428 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.66 51.0 4.46e-01 90.9% 55.4%
3883680 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.66 58.0 3.61e-01 97.7% 40.6%
3905709 243.3.1.22 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cyto_heme_lyase 0.66 58.0 4.64e-01 100.0% 84.4%
4880335 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.64 46.0 4.43e-01 73.9% 88.8%
3471318 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 48.0 4.64e-01 79.5% 74.0%
4046546 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.63 58.0 3.98e-01 100.0% 87.4%
6427 243.5.1.1 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 0.63 51.0 4.98e-01 93.2% 80.0%
3652840 708.1.1.9 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 0.62 47.0 4.81e-01 87.5% 82.4%
5019514 881.2.1.0 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.62 53.0 4.50e-01 93.2% 89.0%
5037511 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.62 47.0 3.02e-01 81.8% 26.9%
5033517 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.61 52.0 4.97e-01 90.9% 99.0%
3964222 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.60 46.0 3.68e-01 100.0% 41.8%
3184966 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.60 54.0 3.61e-01 100.0% 50.4%
2870993 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.60 51.0 4.29e-01 90.9% 95.0%
3400125 7525.1.1.2 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.60 48.0 3.10e-01 87.5% 89.7%
1390080 220.1.1.32 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.60 50.0 3.96e-01 93.2% 45.9%
3243615 708.1.1.18 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DUF7747 0.60 51.0 3.98e-01 92.0% 53.3%
3856870 708.1.1.9 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 0.59 48.0 4.31e-01 90.9% 62.1%
3343255 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.59 54.0 3.34e-01 100.0% 24.3%
3233321 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.59 52.0 3.70e-01 100.0% 40.0%
4203300 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.59 50.0 4.12e-01 92.0% 92.9%
3229874 708.1.1.18 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DUF7747 0.57 49.0 3.90e-01 93.2% 54.5%
4946507 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 41.0 4.42e-01 76.1% 88.0%
3998279 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 49.0 4.53e-01 94.3% 77.3%
3527512 220.1.1.32 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.56 50.0 4.26e-01 97.7% 62.9%
3691461 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.56 48.0 3.50e-01 97.7% 78.5%
185158 3518.1.1.1 a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.55 48.0 3.96e-01 100.0% 90.0%
4943617 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 50.0 3.19e-01 98.9% 24.1%
3685888 222.1.1.27 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 0.54 46.0 3.81e-01 93.2% 86.3%
5051184 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 49.0 4.62e-01 97.7% 100.0%
4939146 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 48.0 3.18e-01 97.7% 31.8%
4998774 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.54 41.0 2.58e-01 80.7% 26.0%
3178905 708.1.2.6 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.54 47.0 3.89e-01 93.2% 70.3%
3648232 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 46.0 3.19e-01 100.0% 92.6%
3486958 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.53 48.0 3.48e-01 100.0% 74.8%
3400912 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.53 44.0 3.35e-01 93.2% 91.8%
4189579 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.53 38.0 3.52e-01 76.1% 99.1%
3598877 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 46.0 3.79e-01 100.0% 93.1%
4063158 5084.1.1.7 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagP 0.51 44.0 3.66e-01 100.0% 85.5%
5054730 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.50 43.0 3.55e-01 97.7% 89.4%
4970858 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.50 39.0 3.67e-01 98.9% 68.2%