←Back to structures

MW239124.1__QQG32194.1__CkP1_0175__00175

Bact-Vir

MW239124.1__QQG32194.1__CkP1_0175__00175

Identity

Accession:
MW239124 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Karamvirus› Citrobacter_phage_CkP1

TaxID: 2799684

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 89-140
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uqtA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.79 56.0 3.56e-01 75.0% 20.2%
3u7iA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.70 49.0 3.25e-01 75.0% 38.1%
1iynA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.66 47.0 3.63e-01 76.9% 58.1%
4zi5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 46.0 2.97e-01 75.0% 17.2%
2qtqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 45.0 3.08e-01 75.0% 34.0%
2g84A01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.56 42.0 3.03e-01 86.5% 91.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2417914 1083.1.1.0 ↗ a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units 0.74 61.0 4.30e-01 88.5% 58.0%
4888789 1083.1.1.1 ↗ a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › gp12-short_mid 0.73 57.0 3.58e-01 86.5% 22.3%
4545823 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 55.0 3.03e-01 98.1% 15.5%
4319962 2007.12.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain › Glyco_hydro_3_C 0.61 45.0 2.82e-01 80.8% 21.3%
D2 medium residues 9-85
PDB
Domain cluster: rep: AP014887.1__BAV81065.1__X__00021__D103-174
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4888789 1083.1.1.1 ↗ a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › gp12-short_mid 0.78 70.0 4.72e-01 100.0% 27.3%
2417914 1083.1.1.0 ↗ a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units 0.66 57.0 4.51e-01 93.5% 48.7%