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MW239124.1__QQG32330.1__CkP1_0278__00278
Bact-VirMW239124.1__QQG32330.1__CkP1_0278__00278
Identity
- Accession:
- MW239124 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Karamvirus›
Citrobacter_phage_CkP1
TaxID: 2799684
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-53
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.67 | 54.0 | 4.99e-01 | 100.0% | 69.7% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.63 | 52.0 | 4.02e-01 | 100.0% | 94.2% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.62 | 44.0 | 4.16e-01 | 100.0% | 62.3% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.62 | 51.0 | 4.40e-01 | 100.0% | 95.2% |
| 2napA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 51.0 | 3.20e-01 | 97.9% | 64.4% |
| 1ia9A02 | 3.20.200.10 | Alpha Beta › Alpha-Beta Barrel › Protein kinase-like fold › MHCK/EF2 kinase | 0.59 | 45.0 | 3.63e-01 | 89.6% | 79.2% |
| 2conA00 | 6.20.210.10 | Special › Other non-globular › Herpes Virus-1 › Nin one binding (NOB1), Zn-ribbon-like | 0.58 | 39.0 | 3.39e-01 | 100.0% | 43.0% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.57 | 47.0 | 3.42e-01 | 100.0% | 91.7% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 3.85e-01 | 100.0% | 54.6% |
| 7ct1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 41.0 | 3.57e-01 | 100.0% | 48.2% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 44.0 | 2.87e-01 | 100.0% | 69.4% |
| 2ff4A03 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.54 | 46.0 | 3.74e-01 | 100.0% | 95.9% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 41.0 | 3.21e-01 | 83.3% | 55.1% |
| 4q0jA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.54 | 42.0 | 3.04e-01 | 87.5% | 48.6% |
| 4dqnA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 41.0 | 3.01e-01 | 91.7% | 53.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3389022 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.75 | 56.0 | 5.55e-01 | 100.0% | 78.0% |
| 3389034 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.73 | 56.0 | 5.43e-01 | 100.0% | 74.5% |
| 3603150 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.70 | 56.0 | 3.60e-01 | 89.6% | 63.0% |
| 3965070 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.67 | 53.0 | 3.48e-01 | 89.6% | 70.5% |
| 3535929 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.67 | 52.0 | 3.57e-01 | 100.0% | 24.0% |
| 3610992 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.66 | 52.0 | 4.14e-01 | 100.0% | 41.9% |
| 3965309 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.65 | 53.0 | 3.37e-01 | 89.6% | 34.5% |
| 4028716 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.61 | 44.0 | 3.28e-01 | 79.2% | 33.3% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 52.0 | 4.93e-01 | 100.0% | 95.0% |
| 3480425 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 39.0 | 4.20e-01 | 97.9% | 88.6% |
| 3586184 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.60 | 51.0 | 3.10e-01 | 97.9% | 56.2% |
| 3579303 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.54 | 42.0 | 3.01e-01 | 91.7% | 50.6% |
| 3699329 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.54 | 41.0 | 2.58e-01 | 100.0% | 13.2% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.53 | 40.0 | 4.08e-01 | 100.0% | 97.8% |
| 4583179 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 42.0 | 4.07e-01 | 95.8% | 100.0% |