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MW258710.1__QQV88594.1__X__00006
Bact-VirMW258710.1__QQV88594.1__X__00006
Identity
- Accession:
- MW258710 ↗
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-69
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2whnA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.67 | 58.0 | 4.85e-01 | 100.0% | 58.2% |
| 1o82A00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.66 | 55.0 | 5.28e-01 | 95.0% | 90.0% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 53.0 | 4.91e-01 | 100.0% | 69.2% |
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.64 | 48.0 | 4.33e-01 | 81.7% | 64.7% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 47.0 | 4.95e-01 | 95.0% | 94.1% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 46.0 | 4.88e-01 | 98.3% | 100.0% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.61 | 41.0 | 4.29e-01 | 70.0% | 80.0% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 3.81e-01 | 75.0% | 58.8% |
| 2hpiA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.59 | 43.0 | 4.11e-01 | 81.7% | 66.2% |
| 4xvxA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.58 | 47.0 | 4.00e-01 | 96.7% | 69.4% |
| 3fnrA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 50.0 | 3.69e-01 | 100.0% | 66.2% |
| 2or0B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 40.0 | 3.31e-01 | 86.7% | 100.0% |
| 8hi4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 38.0 | 2.52e-01 | 80.0% | 19.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933758 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 50.0 | 5.66e-01 | 86.7% | 86.7% |
| 3835731 | 365.1.1.1 ↗ | few secondary structure elements › Crambin-like › Crambin-like › Crambin-like › Thionin | 0.71 | 47.0 | 5.40e-01 | 96.7% | 91.1% |
| 3968272 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.71 | 62.0 | 4.76e-01 | 100.0% | 46.4% |
| 5021617 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.70 | 61.0 | 4.50e-01 | 95.0% | 61.3% |
| 3955580 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.70 | 60.0 | 4.94e-01 | 100.0% | 86.1% |
| 4044743 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.70 | 60.0 | 4.89e-01 | 98.3% | 79.1% |
| 4010830 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.69 | 60.0 | 4.52e-01 | 100.0% | 43.3% |
| 3602900 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.69 | 59.0 | 4.69e-01 | 100.0% | 76.2% |
| 4944123 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.67 | 58.0 | 4.59e-01 | 100.0% | 73.8% |
| 5032425 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.65 | 54.0 | 4.52e-01 | 100.0% | 84.3% |
| 4937180 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.62 | 53.0 | 4.26e-01 | 100.0% | 53.8% |
| 5033486 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.61 | 52.0 | 4.08e-01 | 100.0% | 47.9% |
| 4932792 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.60 | 52.0 | 4.19e-01 | 100.0% | 84.0% |
| 4464384 | 198.2.1.1 ↗ | alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId | 0.54 | 45.0 | 4.38e-01 | 98.3% | 90.0% |
D2
medium
residues 72-114
Domain cluster:
rep: MT310895.1__QJD53396.1__SEA_STEVIEBAY_66__00066__D5-54
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 69.0 | 5.49e-01 | 97.7% | 78.8% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.77 | 57.0 | 4.14e-01 | 100.0% | 28.8% |
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.76 | 58.0 | 4.20e-01 | 100.0% | 29.1% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.75 | 63.0 | 4.29e-01 | 100.0% | 44.9% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.75 | 56.0 | 4.09e-01 | 100.0% | 29.5% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.73 | 51.0 | 4.08e-01 | 97.7% | 37.2% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 50.0 | 3.33e-01 | 79.1% | 98.9% |
| 2p4zA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.68 | 51.0 | 3.15e-01 | 83.7% | 28.7% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.68 | 56.0 | 4.99e-01 | 100.0% | 68.2% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.67 | 58.0 | 4.38e-01 | 100.0% | 41.3% |
| 3nd1A02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.67 | 57.0 | 4.29e-01 | 100.0% | 41.8% |
| 1etb200 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.66 | 55.0 | 4.10e-01 | 100.0% | 38.5% |
| 3o2sB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 49.0 | 3.51e-01 | 86.0% | 26.9% |
| 5fljA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 48.0 | 3.26e-01 | 100.0% | 19.8% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.65 | 54.0 | 4.70e-01 | 97.7% | 98.6% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.65 | 52.0 | 4.51e-01 | 100.0% | 93.5% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.65 | 55.0 | 4.12e-01 | 100.0% | 46.8% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 55.0 | 3.88e-01 | 100.0% | 37.5% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.58e-01 | 100.0% | 30.2% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.63 | 49.0 | 4.12e-01 | 100.0% | 56.5% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.63 | 51.0 | 3.73e-01 | 100.0% | 48.2% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.63 | 52.0 | 4.12e-01 | 97.7% | 69.1% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 53.0 | 3.80e-01 | 100.0% | 39.3% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.62 | 51.0 | 4.16e-01 | 100.0% | 84.8% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 54.0 | 3.97e-01 | 100.0% | 45.3% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.62 | 49.0 | 4.06e-01 | 100.0% | 55.3% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 3.84e-01 | 100.0% | 42.7% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 51.0 | 3.71e-01 | 100.0% | 40.9% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.62 | 51.0 | 4.11e-01 | 100.0% | 80.9% |
| 5a2fA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 3.93e-01 | 100.0% | 59.4% |
| 3on7B00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.61 | 47.0 | 2.94e-01 | 86.0% | 86.7% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 52.0 | 3.56e-01 | 100.0% | 32.1% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.61 | 44.0 | 3.05e-01 | 81.4% | 23.0% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 49.0 | 3.90e-01 | 100.0% | 59.8% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 49.0 | 3.88e-01 | 100.0% | 42.3% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 49.0 | 3.58e-01 | 100.0% | 37.7% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.60 | 50.0 | 4.26e-01 | 100.0% | 60.5% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 45.0 | 3.87e-01 | 100.0% | 49.4% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 49.0 | 3.58e-01 | 100.0% | 40.1% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 45.0 | 3.30e-01 | 83.7% | 75.2% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.59 | 44.0 | 3.07e-01 | 83.7% | 96.3% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 50.0 | 3.46e-01 | 100.0% | 26.9% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 50.0 | 4.50e-01 | 100.0% | 87.1% |
| 6i6rB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 3.80e-01 | 100.0% | 43.4% |
| 3zgzD04 | 2.20.28.290 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.58 | 49.0 | 4.46e-01 | 100.0% | 74.2% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 49.0 | 3.81e-01 | 100.0% | 59.6% |
| 4j2gA00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.58 | 46.0 | 3.09e-01 | 97.7% | 70.8% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.58 | 47.0 | 3.59e-01 | 100.0% | 45.7% |
| 1xe0C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.58 | 48.0 | 3.78e-01 | 100.0% | 43.6% |
| 4jonC00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 47.0 | 3.57e-01 | 100.0% | 85.6% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.57 | 45.0 | 4.04e-01 | 100.0% | 59.7% |
| 1ttnA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 46.0 | 4.06e-01 | 100.0% | 85.1% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.57 | 48.0 | 3.60e-01 | 100.0% | 45.0% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 43.0 | 3.27e-01 | 100.0% | 32.4% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 47.0 | 3.94e-01 | 100.0% | 88.0% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 3.58e-01 | 100.0% | 42.0% |
| 3dn7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 46.0 | 3.33e-01 | 100.0% | 29.7% |
| 5u3fB01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.57 | 46.0 | 3.24e-01 | 90.7% | 54.3% |
| 7ui8A01 | 2.60.40.3930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 47.0 | 3.70e-01 | 100.0% | 51.0% |
| 1iyjB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 41.0 | 3.03e-01 | 88.4% | 56.3% |
| 4dqnA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.56 | 44.0 | 3.08e-01 | 90.7% | 47.5% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.56 | 46.0 | 3.30e-01 | 100.0% | 88.4% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 3.39e-01 | 100.0% | 33.1% |
| 4b7lA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 3.60e-01 | 100.0% | 46.0% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.56 | 45.0 | 3.63e-01 | 100.0% | 54.2% |
| 4xuoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 44.0 | 3.14e-01 | 100.0% | 51.3% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 44.0 | 3.52e-01 | 100.0% | 41.3% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.55 | 41.0 | 3.80e-01 | 100.0% | 62.3% |
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.55 | 46.0 | 3.56e-01 | 100.0% | 64.4% |
| 1uyvA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 45.0 | 2.94e-01 | 100.0% | 22.9% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.55 | 44.0 | 3.38e-01 | 100.0% | 44.3% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 3.51e-01 | 100.0% | 49.0% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 43.0 | 3.63e-01 | 100.0% | 92.8% |
| 1txkA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 46.0 | 2.70e-01 | 100.0% | 15.6% |
| 5xctB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.28e-01 | 95.3% | 80.4% |
| 2vdrB02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.51 | 37.0 | 2.65e-01 | 83.7% | 23.5% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 40.0 | 3.06e-01 | 100.0% | 96.2% |
| 1wmhB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.39e-01 | 97.7% | 90.2% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997522 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.79 | 66.0 | 5.53e-01 | 100.0% | 96.2% |
| 5078886 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.76 | 61.0 | 4.59e-01 | 100.0% | 36.4% |
| 3763290 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.76 | 54.0 | 3.83e-01 | 100.0% | 25.4% |
| 3281602 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.74 | 60.0 | 5.90e-01 | 100.0% | 87.5% |
| 3399251 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.73 | 51.0 | 4.01e-01 | 100.0% | 35.6% |
| 3502194 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.73 | 61.0 | 4.75e-01 | 100.0% | 43.2% |
| 2643927 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.72 | 51.0 | 4.13e-01 | 100.0% | 37.5% |
| 3737483 | 220.1.1.70 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 | 0.72 | 53.0 | 3.60e-01 | 83.7% | 21.8% |
| 4031792 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.72 | 53.0 | 3.36e-01 | 81.4% | 67.0% |
| 3274993 | 10.12.1.52 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 | 0.72 | 59.0 | 3.44e-01 | 100.0% | 10.9% |
| 4632256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 60.0 | 5.12e-01 | 100.0% | 96.0% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.71 | 55.0 | 4.26e-01 | 83.7% | 80.0% |
| 3958896 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.69 | 57.0 | 5.27e-01 | 100.0% | 73.3% |
| 3687025 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.69 | 56.0 | 4.17e-01 | 100.0% | 34.4% |
| 3766042 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.67 | 54.0 | 4.10e-01 | 100.0% | 36.4% |
| 4647537 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.67 | 57.0 | 4.29e-01 | 100.0% | 45.5% |
| 4944025 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.66 | 51.0 | 4.66e-01 | 100.0% | 100.0% |
| 4929272 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.65 | 55.0 | 4.59e-01 | 100.0% | 90.0% |
| 3617714 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.65 | 54.0 | 4.65e-01 | 100.0% | 90.7% |
| 3519916 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.65 | 54.0 | 4.31e-01 | 100.0% | 52.6% |
| 3606454 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.65 | 54.0 | 4.79e-01 | 97.7% | 100.0% |
| 3338287 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.65 | 51.0 | 4.60e-01 | 100.0% | 63.1% |
| 3874262 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.65 | 54.0 | 4.12e-01 | 100.0% | 77.3% |
| 4959407 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.65 | 53.0 | 5.11e-01 | 100.0% | 84.0% |
| 5028344 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 52.0 | 4.24e-01 | 100.0% | 47.1% |
| 3888324 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 54.0 | 4.14e-01 | 100.0% | 50.5% |
| 3746817 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.64 | 53.0 | 4.53e-01 | 100.0% | 94.7% |
| 3595320 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 51.0 | 3.58e-01 | 100.0% | 50.3% |
| 3926235 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.63 | 54.0 | 4.51e-01 | 100.0% | 91.3% |
| 3854772 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.63 | 52.0 | 4.23e-01 | 100.0% | 86.7% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.63 | 50.0 | 5.05e-01 | 100.0% | 95.6% |
| 3901407 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.63 | 52.0 | 4.15e-01 | 100.0% | 68.4% |
| 3721040 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.63 | 51.0 | 3.30e-01 | 100.0% | 18.8% |
| 4562263 | 3435.1.1.1 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC | 0.63 | 49.0 | 3.07e-01 | 100.0% | 14.5% |
| 5052496 | 1.1.5.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like | 0.62 | 54.0 | 3.69e-01 | 100.0% | 43.2% |
| 3479367 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.62 | 51.0 | 4.60e-01 | 100.0% | 65.6% |
| 3581513 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.62 | 52.0 | 4.35e-01 | 100.0% | 85.0% |
| 3492431 | 133.1.1.0 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) | 0.62 | 52.0 | 3.38e-01 | 100.0% | 46.0% |
| 3704713 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.62 | 43.0 | 3.57e-01 | 100.0% | 40.0% |
| 3974708 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 43.0 | 3.13e-01 | 74.4% | 28.8% |
| 3711220 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.62 | 49.0 | 4.38e-01 | 93.0% | 96.9% |
| 3783859 | 221.1.1.51 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 | 0.62 | 44.0 | 3.32e-01 | 100.0% | 28.8% |
| 3954591 | 1075.1.2.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › DUF2567 | 0.61 | 48.0 | 3.35e-01 | 90.7% | 88.1% |
| 3606610 | 11.1.1.720 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IG_AIR9 | 0.61 | 47.0 | 3.78e-01 | 100.0% | 40.0% |
| 3607227 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.61 | 50.0 | 4.83e-01 | 95.3% | 98.0% |
| 3252117 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 50.0 | 3.11e-01 | 100.0% | 15.3% |
| 3214302 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 48.0 | 3.78e-01 | 100.0% | 55.7% |
| 3431400 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 3.56e-01 | 100.0% | 43.3% |
| 3475431 | 133.1.1.0 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) | 0.61 | 50.0 | 3.24e-01 | 100.0% | 41.2% |
| 3890381 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.60 | 49.0 | 4.15e-01 | 100.0% | 88.7% |
| 5021979 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.59 | 51.0 | 3.75e-01 | 100.0% | 87.8% |
| 3704345 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 4.05e-01 | 100.0% | 60.0% |
| 3553026 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.58 | 48.0 | 3.87e-01 | 100.0% | 76.8% |
| 3878819 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 48.0 | 3.79e-01 | 100.0% | 46.0% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.57 | 45.0 | 4.50e-01 | 100.0% | 93.3% |
| 3550624 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.57 | 42.0 | 3.36e-01 | 100.0% | 35.5% |
| 3779994 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.57 | 42.0 | 2.96e-01 | 86.0% | 30.9% |
| 3968122 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.57 | 46.0 | 4.55e-01 | 100.0% | 93.3% |
| 4018289 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 45.0 | 3.32e-01 | 100.0% | 92.4% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.57 | 45.0 | 4.49e-01 | 100.0% | 93.3% |
| 3395224 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 44.0 | 3.59e-01 | 100.0% | 42.1% |
| 3907395 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.57 | 47.0 | 3.70e-01 | 100.0% | 51.0% |
| 3640834 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.56 | 42.0 | 3.12e-01 | 79.1% | 53.1% |
| 3998052 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.56 | 44.0 | 3.45e-01 | 100.0% | 86.1% |
| 3972199 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.56 | 48.0 | 2.95e-01 | 100.0% | 21.8% |
| 3930342 | 822.1.1.2 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 | 0.55 | 44.0 | 4.19e-01 | 100.0% | 74.5% |
| 3398228 | 221.7.1.1 ↗ | a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 › E2_bind | 0.55 | 47.0 | 3.65e-01 | 100.0% | 51.0% |
| 3618241 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 44.0 | 3.49e-01 | 100.0% | 75.2% |
| 3261977 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.54 | 40.0 | 3.26e-01 | 79.1% | 47.1% |
| 4946668 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.54 | 43.0 | 3.07e-01 | 100.0% | 81.2% |
| 4156870 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.53 | 43.0 | 3.53e-01 | 100.0% | 81.1% |
| 3593442 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 41.0 | 3.26e-01 | 100.0% | 36.2% |
| 3817993 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.53 | 44.0 | 3.29e-01 | 100.0% | 63.2% |
| 3440710 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 37.0 | 3.10e-01 | 100.0% | 37.0% |
| 3710526 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 43.0 | 3.32e-01 | 97.7% | 39.1% |
| 4469838 | 10.32.1.215 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29167 | 0.52 | 41.0 | 2.91e-01 | 100.0% | 61.8% |
| 4969538 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.51 | 38.0 | 2.74e-01 | 86.0% | 74.8% |
| 3925464 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 39.0 | 3.41e-01 | 100.0% | 91.3% |