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MW258710.1__QQV88638.1__X__00050

Bact-Vir

MW258710.1__QQV88638.1__X__00050

Identity

Accession:
MW258710 ↗
Kingdom:
phage

Quality

71.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-53
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4khbD02 2.30.29.220 Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) 0.65 52.0 4.44e-01 84.9% 79.0%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.65 51.0 4.25e-01 84.9% 56.2%
3mixA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.64 49.0 3.77e-01 83.0% 70.0%
7mi4A02 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.63 48.0 4.28e-01 83.0% 62.2%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.62 47.0 4.03e-01 92.5% 52.4%
4lpqA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.62 52.0 3.99e-01 98.1% 96.9%
7kfuC01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.61 48.0 4.26e-01 84.9% 62.7%
1zatA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.61 48.0 3.80e-01 92.5% 100.0%
6i1cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 46.0 3.67e-01 83.0% 77.8%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 42.0 3.67e-01 92.5% 46.5%
3tx4A02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.59 48.0 3.64e-01 96.2% 89.4%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 3.42e-01 96.2% 44.6%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.58 41.0 3.14e-01 73.6% 48.4%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.58 46.0 3.62e-01 90.6% 90.8%
5u81A01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.58 45.0 2.91e-01 86.8% 35.9%
8gtyA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.58 49.0 3.53e-01 100.0% 88.4%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.00e-01 94.3% 33.4%
3hi0A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.56 46.0 3.31e-01 98.1% 84.7%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.56 40.0 3.05e-01 79.2% 42.5%
2z1cB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 3.59e-01 75.5% 79.7%
4gc1A01 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.56 44.0 3.52e-01 86.8% 53.8%
2nttA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 36.0 3.40e-01 86.8% 51.4%
2wm1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 38.0 2.46e-01 77.4% 22.6%
4z7aA03 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.55 44.0 3.46e-01 96.2% 89.3%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 2.90e-01 96.2% 97.3%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.55e-01 84.9% 58.6%
2rh0A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 36.0 3.50e-01 92.5% 59.4%
4epkB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 38.0 2.44e-01 81.1% 24.8%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 43.0 2.98e-01 100.0% 68.2%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 34.0 2.89e-01 86.8% 35.3%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 34.0 3.34e-01 90.6% 57.1%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 2.87e-01 98.1% 38.2%
1o4yA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 2.85e-01 100.0% 96.7%
2fkiA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.52 36.0 2.93e-01 73.6% 66.9%
3noyB02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.52 35.0 2.98e-01 84.9% 38.9%
3iylW04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.51e-01 79.2% 34.3%
1x9zA01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.52 38.0 3.27e-01 83.0% 62.4%
3kdgB01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.52 40.0 3.43e-01 86.8% 57.0%
2vy0B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 2.82e-01 100.0% 58.9%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.51 40.0 3.86e-01 94.3% 100.0%
4bpzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 2.86e-01 98.1% 28.3%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 2.99e-01 98.1% 36.7%
1wrjA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.50 37.0 3.52e-01 96.2% 62.7%
3gygC01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.50 39.0 2.78e-01 92.5% 74.1%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5047010 2008.1.1.63 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MvaI_BcnI 0.72 61.0 3.94e-01 92.5% 36.4%
4987025 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.69 50.0 3.10e-01 75.5% 74.0%
4406214 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.66 40.0 3.28e-01 79.2% 33.3%
3238141 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.66 47.0 2.88e-01 75.5% 16.9%
3618917 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 51.0 4.06e-01 86.8% 71.8%
3938793 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.65 45.0 4.51e-01 92.5% 70.9%
3175415 211.1.1.55 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 0.65 42.0 4.06e-01 84.9% 58.3%
3163824 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.63 52.0 3.32e-01 94.3% 73.1%
3969743 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.62 50.0 3.72e-01 90.6% 97.9%
4609836 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 3.79e-01 75.5% 78.8%
1412633 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 39.0 3.85e-01 77.4% 58.6%
1120883 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.62 52.0 3.99e-01 98.1% 96.9%
4410211 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.61 51.0 3.89e-01 96.2% 99.2%
5022518 4279.1.1.1 a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC 0.61 40.0 2.99e-01 73.6% 23.9%
3958193 4091.1.1.0 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.60 46.0 3.39e-01 84.9% 70.0%
4947563 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.60 46.0 2.80e-01 92.5% 13.1%
1220824 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.60 48.0 3.44e-01 92.5% 73.0%
3964337 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.60 50.0 3.45e-01 98.1% 67.5%
1140434 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.60 47.0 2.83e-01 86.8% 13.0%
4088587 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.59 44.0 2.74e-01 90.6% 14.1%
3486278 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 47.0 3.87e-01 92.5% 71.4%
4649506 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.59 44.0 2.75e-01 83.0% 14.6%
4542362 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.59 45.0 2.78e-01 84.9% 14.1%
3957156 4091.1.1.0 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.59 47.0 3.64e-01 92.5% 83.8%
4949337 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.58 49.0 3.27e-01 96.2% 58.7%
4933934 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.58 46.0 2.80e-01 86.8% 14.2%
4000029 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.58 47.0 2.92e-01 90.6% 28.3%
4302389 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.58 48.0 3.64e-01 96.2% 97.8%
3300781 5.1.4.226 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7899 0.58 42.0 2.76e-01 79.2% 22.3%
4438233 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.58 38.0 3.07e-01 75.5% 34.3%
3237235 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.57 47.0 2.92e-01 92.5% 34.6%
2532617 220.1.1.31 beta barrels › PH domain-like › PH domain-like › PH domain-like › REC114-like 0.57 46.0 3.58e-01 92.5% 65.6%
3398539 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.56 46.0 4.11e-01 96.2% 87.5%
4148226 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.56 36.0 2.90e-01 73.6% 31.8%
4336160 319.1.1.21 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › GvpH 0.56 43.0 3.76e-01 83.0% 62.5%
3487549 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 47.0 2.61e-01 96.2% 19.4%
4989851 2007.1.5.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like 0.55 47.0 3.27e-01 100.0% 42.1%
3785731 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 46.0 3.10e-01 98.1% 25.9%
3183898 394.1.1.4 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › PF30553 0.55 38.0 3.87e-01 94.3% 75.5%
4033610 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.55 36.0 2.87e-01 73.6% 32.7%
4645698 2484.1.1.53 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB_Mbl 0.55 47.0 3.29e-01 100.0% 91.9%
3781352 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.74e-01 86.8% 29.3%
5077602 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.54 47.0 2.96e-01 96.2% 71.9%
3662606 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 47.0 3.12e-01 100.0% 48.2%
4608534 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.54 45.0 2.81e-01 96.2% 29.5%
3938607 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.53 42.0 2.42e-01 88.7% 44.1%
3993085 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.53 40.0 2.82e-01 86.8% 53.8%
3617551 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.53 38.0 3.60e-01 81.1% 63.1%
3391414 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.53 43.0 4.17e-01 96.2% 91.7%
4633966 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.52 44.0 3.58e-01 100.0% 70.0%
4634067 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.52 45.0 3.40e-01 98.1% 65.2%
3175648 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.52 44.0 2.79e-01 100.0% 50.0%
4030002 4263.2.1.0 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.52 39.0 3.72e-01 88.7% 70.8%
3644106 10.1.1.3 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin 0.52 41.0 3.05e-01 92.5% 85.0%
4553383 319.1.1.27 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF5450 0.51 39.0 3.57e-01 83.0% 71.4%
3989835 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 39.0 3.23e-01 96.2% 98.3%
3841972 6043.1.1.4 a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.50 34.0 2.65e-01 73.6% 60.7%
4414836 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.50 40.0 2.43e-01 100.0% 34.4%
3763184 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.50 40.0 2.77e-01 92.5% 66.5%
D2 medium residues 56-105
PDB
D3 medium residues 112-147
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.70 50.0 2.96e-01 77.8% 10.4%
5o5jC01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.70 49.0 3.69e-01 75.0% 74.4%
7dklA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 3.75e-01 80.6% 66.7%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.67 47.0 3.43e-01 80.6% 92.4%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.67 52.0 3.92e-01 100.0% 86.2%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.66 48.0 3.78e-01 83.3% 73.8%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 46.0 3.47e-01 77.8% 56.4%
2h2yA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.65 52.0 3.72e-01 94.4% 93.1%
4xaaA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.64 49.0 3.08e-01 88.9% 21.3%
4ciuA04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 49.0 3.89e-01 97.2% 95.7%
1x23B00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.64 52.0 3.55e-01 100.0% 71.7%
2a02A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.64 52.0 4.20e-01 97.2% 100.0%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 45.0 3.31e-01 80.6% 31.0%
1dekA02 1.10.238.70 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.63 49.0 3.51e-01 91.7% 71.3%
1bvyB00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.63 49.0 2.83e-01 94.4% 12.3%
4at7A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.63 53.0 3.54e-01 100.0% 71.7%
5cqgA05 1.10.357.90 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Telomerase reverse transcriptase (TERT), thumb domain 0.63 46.0 3.00e-01 83.3% 42.9%
6guvA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.62 44.0 3.08e-01 77.8% 29.1%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 49.0 2.98e-01 97.2% 29.6%
1pfkA01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 49.0 3.26e-01 100.0% 19.0%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.62 51.0 2.97e-01 100.0% 67.6%
5adxJ01 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.61 47.0 3.64e-01 91.7% 84.9%
1ce7A02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.61 44.0 3.52e-01 80.6% 70.9%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.61 46.0 3.13e-01 91.7% 20.4%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 50.0 3.70e-01 100.0% 33.0%
6l2cB00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 48.0 2.81e-01 100.0% 60.4%
6n6qD00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.60 48.0 2.79e-01 100.0% 17.5%
7e6gA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 47.0 3.27e-01 97.2% 55.0%
3bjoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 3.44e-01 91.7% 64.1%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 43.0 3.11e-01 97.2% 93.2%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.59 45.0 3.04e-01 86.1% 79.1%
4uhiA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.59 44.0 2.59e-01 100.0% 16.6%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 48.0 3.57e-01 100.0% 34.0%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 45.0 3.14e-01 97.2% 73.1%
2qlcA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.58 43.0 3.17e-01 94.4% 32.5%
4nhxA02 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.57 44.0 2.78e-01 94.4% 71.5%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.57 45.0 3.47e-01 100.0% 75.2%
4iduB01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.57 40.0 2.86e-01 77.8% 23.6%
1u6gC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 47.0 2.50e-01 100.0% 5.4%
2iuwA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.57 49.0 3.10e-01 100.0% 40.5%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 46.0 2.82e-01 97.2% 69.6%
3bn0A00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.56 42.0 3.23e-01 83.3% 31.6%
4kdyB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 44.0 3.44e-01 88.9% 76.2%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.56 46.0 3.16e-01 100.0% 45.3%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 3.53e-01 94.4% 51.9%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.53e-01 94.4% 52.0%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 2.91e-01 100.0% 99.4%
1bwzA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 39.0 2.78e-01 75.0% 22.0%
2ch0A01 1.10.10.1180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain 0.54 40.0 3.16e-01 94.4% 79.6%
5l0rB00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.54 37.0 3.64e-01 91.7% 64.1%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.53 46.0 3.12e-01 100.0% 26.9%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.27e-01 97.2% 39.8%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.53 42.0 3.42e-01 94.4% 97.4%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.45e-01 100.0% 71.3%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.54e-01 88.9% 55.2%
3aa0B01 1.20.58.570 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain 0.53 40.0 3.15e-01 91.7% 51.1%
4uyiA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.52 44.0 3.06e-01 100.0% 76.4%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.17e-01 94.4% 50.6%
2pmzB05 3.90.1070.20 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.51 42.0 3.32e-01 97.2% 67.5%
6n59A02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 39.0 3.09e-01 88.9% 77.4%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5035493 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.69 49.0 3.54e-01 77.8% 63.8%
3234976 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.68 47.0 3.38e-01 75.0% 90.9%
3810963 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 47.0 3.12e-01 75.0% 17.5%
3220364 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.67 48.0 3.12e-01 86.1% 70.0%
3603208 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.67 49.0 4.02e-01 80.6% 77.1%
3935332 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.67 48.0 3.28e-01 77.8% 51.5%
3828336 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.67 46.0 3.24e-01 72.2% 74.6%
4271212 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.66 47.0 3.26e-01 77.8% 54.5%
4215095 604.39.1.0 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.65 49.0 2.90e-01 91.7% 25.9%
4024621 524.1.1.1 alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.65 50.0 3.42e-01 100.0% 49.7%
4259368 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 44.0 3.17e-01 77.8% 79.2%
3620218 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 45.0 3.56e-01 83.3% 37.1%
3508353 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.63 47.0 2.90e-01 86.1% 25.2%
3808578 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 50.0 4.17e-01 100.0% 48.6%
4381440 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 49.0 3.64e-01 100.0% 31.3%
3394225 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 47.0 3.56e-01 100.0% 31.3%
60305 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.61 50.0 3.73e-01 100.0% 34.0%
1397674 7581.1.1.33 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, SpoVAD 0.61 46.0 2.90e-01 100.0% 89.6%
5029669 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 48.0 3.52e-01 100.0% 29.2%
3672413 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 3.56e-01 88.9% 55.6%
4978330 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.60 44.0 3.20e-01 86.1% 43.3%
3594965 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 48.0 3.38e-01 100.0% 25.7%
3310256 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 48.0 3.72e-01 97.2% 72.2%
4928315 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 48.0 3.97e-01 100.0% 48.0%
3550136 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 49.0 3.55e-01 100.0% 31.3%
5028061 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 47.0 3.64e-01 100.0% 37.8%
5062471 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 46.0 3.52e-01 100.0% 32.7%
3298201 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 47.0 4.01e-01 100.0% 51.4%
4025452 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 47.0 3.50e-01 100.0% 31.3%
4995927 3715.1.1.0 a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e 0.59 44.0 3.53e-01 94.4% 36.7%
3579472 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 48.0 3.40e-01 100.0% 27.7%
4017372 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 48.0 3.52e-01 100.0% 31.3%
4457710 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 47.0 3.43e-01 100.0% 30.0%
4681355 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 48.0 3.46e-01 100.0% 30.0%
4666900 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 47.0 3.41e-01 100.0% 28.8%
1000517 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 48.0 3.61e-01 100.0% 35.6%
3712081 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 47.0 3.51e-01 100.0% 32.7%
3468311 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.58 48.0 2.80e-01 100.0% 14.3%
3228583 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 46.0 3.40e-01 100.0% 31.3%
3593339 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 47.0 3.47e-01 100.0% 31.3%
3882804 263.1.1.4 a+b three layers › SRF-like › SRF-like › SRF-like › PRAS_NT 0.57 46.0 3.95e-01 97.2% 65.6%
3202986 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 49.0 3.39e-01 100.0% 28.8%
3406351 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.57 46.0 3.42e-01 100.0% 32.7%
3348687 109.4.1.1156 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.57 46.0 3.19e-01 94.4% 37.7%
3586018 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 46.0 3.21e-01 100.0% 25.7%
3690513 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 47.0 3.26e-01 100.0% 27.1%
3505182 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 3.39e-01 88.9% 43.8%
4224821 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.55 44.0 3.24e-01 100.0% 31.3%
3482243 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.55 45.0 3.99e-01 97.2% 69.1%
4991352 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 42.0 2.57e-01 91.7% 26.3%
3641281 109.4.1.2665 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_7, PPR_3, E_motif 0.54 47.0 2.58e-01 97.2% 15.0%
4184822 2002.1.1.69 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MM_CoA_mutase 0.54 45.0 2.49e-01 100.0% 8.9%
1247620 101.1.1.72 alpha arrays › HTH › HTH › Three-helical HTH › GP3_package 0.54 46.0 3.11e-01 100.0% 25.9%
None 0.52 40.0 2.61e-01 94.4% 32.0%
141070 223.3.1.1 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.52 37.0 3.49e-01 94.4% 93.0%
3810025 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.50 42.0 3.40e-01 94.4% 50.0%