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MW273921.1__QPZ53388.1__HTVC028P_gp06__00006
Bact-VirMW273921.1__QPZ53388.1__HTVC028P_gp06__00006
Identity
- Accession:
- MW273921 ↗
- Kingdom:
- phage
Quality
78.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-76
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yc9B01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.74 | 46.0 | 4.14e-01 | 81.2% | 45.4% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.73 | 52.0 | 5.21e-01 | 84.1% | 72.2% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.73 | 52.0 | 4.26e-01 | 84.1% | 41.3% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.72 | 53.0 | 5.25e-01 | 98.6% | 74.0% |
| 6hn7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 5.38e-01 | 89.9% | 77.8% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 49.0 | 4.11e-01 | 84.1% | 42.1% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 52.0 | 4.60e-01 | 94.2% | 55.6% |
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 48.0 | 3.94e-01 | 84.1% | 39.2% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.68 | 47.0 | 4.83e-01 | 98.6% | 76.1% |
| 2kvvA00 | 1.10.1660.60 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 | 0.64 | 51.0 | 4.98e-01 | 89.9% | 84.6% |
| 1s6lA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 39.0 | 4.29e-01 | 75.4% | 80.8% |
| 2l49B01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 37.0 | 4.10e-01 | 82.6% | 77.4% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 39.0 | 4.04e-01 | 78.3% | 66.7% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 39.0 | 4.08e-01 | 84.1% | 71.4% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 38.0 | 3.71e-01 | 78.3% | 57.3% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 39.0 | 3.79e-01 | 79.7% | 58.4% |
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 38.0 | 4.04e-01 | 91.3% | 73.8% |
| 1huxA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 43.0 | 3.47e-01 | 82.6% | 38.6% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 40.0 | 3.51e-01 | 85.5% | 46.6% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 41.0 | 4.21e-01 | 85.5% | 74.2% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.57 | 34.0 | 4.02e-01 | 85.5% | 85.7% |
| 4b43A01 | 1.10.10.2480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 40.0 | 4.05e-01 | 85.5% | 77.9% |
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.56 | 32.0 | 3.88e-01 | 85.5% | 87.0% |
| 1nnhA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 46.0 | 3.19e-01 | 100.0% | 62.1% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 3.53e-01 | 78.3% | 60.5% |
| 1sseB00 | 1.10.238.100 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › YAP1 redox domain. Chain B | 0.54 | 44.0 | 4.17e-01 | 94.2% | 73.3% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 35.0 | 3.53e-01 | 78.3% | 66.2% |
| 3pxpA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 40.0 | 3.65e-01 | 85.5% | 63.4% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.01e-01 | 84.1% | 39.9% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.51e-01 | 81.2% | 91.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009029 | 101.1.9.45 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA | 0.84 | 67.0 | 7.10e-01 | 85.5% | 100.0% |
| 3954861 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.80 | 58.0 | 6.46e-01 | 84.1% | 96.4% |
| 3955723 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.79 | 55.0 | 6.26e-01 | 82.6% | 100.0% |
| 4994568 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.79 | 58.0 | 6.35e-01 | 87.0% | 98.2% |
| 5064906 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.77 | 57.0 | 6.26e-01 | 97.1% | 98.2% |
| 3980161 | 101.1.9.45 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA | 0.77 | 55.0 | 6.00e-01 | 82.6% | 94.5% |
| 4933561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.76 | 56.0 | 6.14e-01 | 87.0% | 98.2% |
| 388408 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.76 | 58.0 | 4.78e-01 | 88.4% | 46.7% |
| 3960386 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 61.0 | 6.55e-01 | 95.7% | 100.0% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.75 | 55.0 | 4.64e-01 | 88.4% | 47.0% |
| 3941467 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.75 | 53.0 | 5.11e-01 | 84.1% | 65.0% |
| 4101677 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.74 | 55.0 | 4.43e-01 | 97.1% | 40.7% |
| 3976864 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.74 | 60.0 | 5.84e-01 | 88.4% | 81.3% |
| 4536234 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.74 | 54.0 | 4.56e-01 | 87.0% | 47.0% |
| 3281621 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.73 | 55.0 | 6.02e-01 | 87.0% | 100.0% |
| 3164271 | 101.1.9.136 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF29765 | 0.72 | 59.0 | 6.14e-01 | 88.4% | 95.4% |
| 3281871 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.72 | 51.0 | 4.29e-01 | 84.1% | 43.3% |
| 3589467 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.72 | 55.0 | 5.11e-01 | 100.0% | 65.9% |
| 3291393 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.72 | 54.0 | 4.53e-01 | 95.7% | 47.8% |
| 3966930 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.72 | 52.0 | 4.45e-01 | 87.0% | 48.2% |
| 3285399 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 50.0 | 5.67e-01 | 82.6% | 100.0% |
| 2168161 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.71 | 53.0 | 5.73e-01 | 98.6% | 96.5% |
| 5041445 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 56.0 | 5.15e-01 | 100.0% | 65.6% |
| 3285380 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 52.0 | 4.30e-01 | 97.1% | 43.2% |
| 1068666 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.71 | 52.0 | 4.60e-01 | 88.4% | 54.0% |
| 1316879 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 56.0 | 5.92e-01 | 98.6% | 98.4% |
| 4087721 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 50.0 | 5.15e-01 | 95.7% | 80.0% |
| 3949463 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.70 | 52.0 | 4.43e-01 | 100.0% | 47.8% |
| 3587879 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.70 | 51.0 | 4.39e-01 | 97.1% | 49.1% |
| 3942751 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.70 | 56.0 | 4.59e-01 | 85.5% | 49.2% |
| 3281073 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 50.0 | 4.37e-01 | 84.1% | 50.5% |
| 4061721 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.69 | 49.0 | 4.00e-01 | 84.1% | 40.0% |
| 4504812 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 56.0 | 5.21e-01 | 88.4% | 89.4% |
| 3945289 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.69 | 49.0 | 4.06e-01 | 85.5% | 41.6% |
| 5075145 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.69 | 52.0 | 5.37e-01 | 84.1% | 86.2% |
| 3951460 | 101.30.1.3 ↗ | alpha arrays › HTH › Rv2175c › Rv2175c › Rv2175c_wHTH | 0.68 | 54.0 | 4.99e-01 | 95.7% | 66.7% |
| 4668740 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.68 | 52.0 | 4.56e-01 | 89.9% | 54.3% |
| 4334333 | 101.1.9.1 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind | 0.68 | 49.0 | 3.99e-01 | 100.0% | 38.6% |
| None | — | 0.68 | 51.0 | 5.00e-01 | 94.2% | 74.0% | |
| 3946914 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.68 | 48.0 | 3.93e-01 | 84.1% | 40.0% |
| 3974460 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.67 | 47.0 | 3.93e-01 | 87.0% | 40.0% |
| 4420911 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 48.0 | 3.90e-01 | 98.6% | 39.3% |
| 4604028 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 47.0 | 3.90e-01 | 84.1% | 41.6% |
| 4117084 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 54.0 | 4.81e-01 | 91.3% | 62.0% |
| 3284686 | 101.1.9.84 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 | 0.66 | 52.0 | 3.58e-01 | 85.5% | 98.3% |
| 3280762 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 52.0 | 5.56e-01 | 98.6% | 100.0% |
| 4975365 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 56.0 | 5.58e-01 | 97.1% | 95.7% |
| 3195578 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.62 | 53.0 | 4.22e-01 | 100.0% | 47.4% |
| 3989255 | 101.1.9.141 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF536, HTH_24 | 0.62 | 45.0 | 3.49e-01 | 87.0% | 33.8% |
| 3262137 | 101.1.2.167 ↗ | alpha arrays › HTH › HTH › winged helix domain › XRN1_D2_D3 | 0.62 | 53.0 | 4.18e-01 | 97.1% | 55.3% |
| 3582423 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 54.0 | 4.94e-01 | 97.1% | 90.0% |
| 5073620 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 48.0 | 4.92e-01 | 98.6% | 95.4% |
| 5010219 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 34.0 | 4.29e-01 | 78.3% | 97.5% |
| 3587522 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 42.0 | 4.21e-01 | 85.5% | 75.7% |
| 3985012 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.57 | 38.0 | 3.76e-01 | 84.1% | 64.0% |
| 4670849 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 39.0 | 3.61e-01 | 97.1% | 54.4% |
| 4031520 | 101.1.9.64 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_23 | 0.57 | 45.0 | 4.66e-01 | 100.0% | 96.9% |
| 4401871 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 38.0 | 4.13e-01 | 97.1% | 90.9% |
| 3664931 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.56 | 39.0 | 4.46e-01 | 95.7% | 100.0% |
| 3948669 | 101.1.9.26 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like | 0.55 | 43.0 | 3.73e-01 | 100.0% | 52.2% |
| 3590852 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.55 | 41.0 | 3.78e-01 | 85.5% | 60.0% |
| 4963272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.63e-01 | 87.0% | 62.0% |
| 5078667 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.51 | 36.0 | 3.04e-01 | 73.9% | 42.5% |