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MW273921.1__QPZ53395.1__HTVC028P_gp13__00013
Bact-VirMW273921.1__QPZ53395.1__HTVC028P_gp13__00013
Identity
- Accession:
- MW273921 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-99
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 46.0 | 4.11e-01 | 72.6% | 56.9% |
| 1zvwA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.65 | 44.0 | 4.56e-01 | 76.7% | 77.3% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 52.0 | 4.62e-01 | 93.2% | 66.1% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 53.0 | 3.92e-01 | 93.2% | 62.9% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 50.0 | 4.53e-01 | 84.9% | 92.8% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.63 | 41.0 | 4.30e-01 | 74.0% | 73.1% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 49.0 | 4.18e-01 | 84.9% | 91.7% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 49.0 | 4.22e-01 | 84.9% | 87.7% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 44.0 | 4.67e-01 | 75.3% | 100.0% |
| 4ga0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 3.57e-01 | 86.3% | 39.2% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 52.0 | 3.56e-01 | 97.3% | 54.9% |
| 3emuA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 48.0 | 3.93e-01 | 94.5% | 96.5% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 42.0 | 4.53e-01 | 84.9% | 95.1% |
| 2c12A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 48.0 | 4.09e-01 | 97.3% | 89.0% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 46.0 | 3.96e-01 | 90.4% | 74.2% |
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 44.0 | 4.15e-01 | 86.3% | 93.3% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 45.0 | 3.82e-01 | 91.8% | 71.1% |
| 2nt2A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 45.0 | 3.70e-01 | 91.8% | 100.0% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.55 | 41.0 | 3.98e-01 | 83.6% | 96.6% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 4.19e-01 | 82.2% | 98.6% |
| 4f92B10 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.54 | 40.0 | 3.29e-01 | 87.7% | 41.3% |
| 3mzvA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 45.0 | 2.98e-01 | 97.3% | 48.2% |
| 1s4kA00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.52 | 42.0 | 3.62e-01 | 90.4% | 60.8% |
| 6tepC02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.50 | 43.0 | 3.27e-01 | 97.3% | 50.8% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4137277 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.70 | 44.0 | 3.71e-01 | 100.0% | 40.0% |
| 3809136 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.69 | 49.0 | 5.12e-01 | 74.0% | 96.9% |
| 1108268 | 3770.1.1.1 ↗ | alpha arrays › Flax-rust effector AvrM › Flax-rust effector AvrM › Flax-rust effector AvrM › AvrM-A | 0.68 | 40.0 | 3.19e-01 | 91.8% | 30.7% |
| 5061261 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.67 | 46.0 | 4.83e-01 | 71.2% | 92.2% |
| 4932863 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.66 | 45.0 | 4.41e-01 | 71.2% | 81.2% |
| 3632915 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.65 | 52.0 | 5.33e-01 | 87.7% | 98.6% |
| 3457118 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.64 | 49.0 | 3.24e-01 | 82.2% | 23.2% |
| 3643902 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 47.0 | 3.87e-01 | 76.7% | 92.3% |
| 5083776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 47.0 | 4.38e-01 | 79.5% | 93.7% |
| 3590987 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.64 | 42.0 | 4.20e-01 | 78.1% | 65.3% |
| 3683778 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.63 | 50.0 | 4.48e-01 | 86.3% | 75.2% |
| 3328228 | 601.33.1.7 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › Exo70_N | 0.63 | 48.0 | 4.60e-01 | 82.2% | 84.7% |
| 4019574 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 47.0 | 4.09e-01 | 82.2% | 60.9% |
| 4238416 | 603.1.1.125 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PLU-1 | 0.62 | 51.0 | 4.62e-01 | 90.4% | 66.0% |
| 3789554 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 47.0 | 4.35e-01 | 79.5% | 80.0% |
| 4382041 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.62 | 42.0 | 4.47e-01 | 71.2% | 90.8% |
| 3200913 | 109.2.1.13 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_76 | 0.62 | 53.0 | 3.25e-01 | 100.0% | 32.8% |
| 3930837 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 47.0 | 3.95e-01 | 80.8% | 90.0% |
| 3353941 | 1134.1.1.7 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 | 0.62 | 48.0 | 5.03e-01 | 82.2% | 93.8% |
| 3720496 | 4030.1.1.12 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › PLU-1 | 0.61 | 51.0 | 4.37e-01 | 93.2% | 68.3% |
| 4020850 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.61 | 44.0 | 2.92e-01 | 75.3% | 92.9% |
| 3594525 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 45.0 | 4.05e-01 | 80.8% | 93.0% |
| 3589400 | 192.5.1.4 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF1140 | 0.59 | 43.0 | 3.99e-01 | 80.8% | 100.0% |
| 3909974 | 109.4.1.601 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PLU-1 | 0.59 | 50.0 | 3.55e-01 | 100.0% | 30.0% |
| 3515490 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 46.0 | 4.58e-01 | 87.7% | 94.7% |
| 53487 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.58 | 48.0 | 4.13e-01 | 97.3% | 87.1% |
| 3362789 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.57 | 46.0 | 4.22e-01 | 90.4% | 78.0% |
| 4266582 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.56 | 40.0 | 4.23e-01 | 76.7% | 89.2% |
| 3404777 | 109.4.1.44 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps35 | 0.55 | 48.0 | 3.17e-01 | 100.0% | 50.9% |
| 3247689 | 109.4.1.44 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps35 | 0.55 | 48.0 | 3.19e-01 | 100.0% | 54.5% |
| 3448849 | 605.8.1.5 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Med26 | 0.55 | 40.0 | 4.16e-01 | 80.8% | 100.0% |
| 4387419 | 378.1.1.5 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_1 | 0.54 | 37.0 | 3.23e-01 | 72.6% | 61.0% |
| 3257744 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.37e-01 | 100.0% | 93.3% |
| 3512966 | 604.27.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac | 0.52 | 42.0 | 4.29e-01 | 94.5% | 98.6% |
| 3482901 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.51 | 36.0 | 3.55e-01 | 74.0% | 76.2% |
| 2410023 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.51 | 42.0 | 2.90e-01 | 100.0% | 55.4% |