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MW273921.1__QPZ53398.1__HTVC028P_gp16__00016
Bact-VirMW273921.1__QPZ53398.1__HTVC028P_gp16__00016
Identity
- Accession:
- MW273921 ↗
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-71
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zh5A00 | 2.40.128.710 | Mainly Beta › Beta Barrel › Lipocalin › Surface-adhesin protein E | 0.79 | 54.0 | 4.16e-01 | 70.3% | 40.9% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.75 | 45.0 | 5.25e-01 | 100.0% | 88.6% |
| 1z2nX02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.67 | 47.0 | 3.86e-01 | 71.9% | 71.6% |
| 6oziB00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.67 | 49.0 | 3.34e-01 | 79.7% | 41.9% |
| 4yg6B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 4.11e-01 | 100.0% | 76.1% |
| 3eweA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 52.0 | 3.53e-01 | 100.0% | 38.0% |
| 2pm9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 51.0 | 3.25e-01 | 96.9% | 35.5% |
| 2opjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 42.0 | 3.83e-01 | 75.0% | 80.2% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 49.0 | 3.15e-01 | 98.4% | 29.7% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 50.0 | 3.18e-01 | 98.4% | 60.0% |
| 5b3pA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.58 | 48.0 | 3.90e-01 | 96.9% | 64.9% |
| 4j0xA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 50.0 | 3.13e-01 | 100.0% | 29.9% |
| 1u4cB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 51.0 | 3.23e-01 | 100.0% | 29.1% |
| 2wbnA00 | 3.30.420.280 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.57 | 50.0 | 3.67e-01 | 100.0% | 43.8% |
| 6bm0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 47.0 | 3.02e-01 | 96.9% | 33.5% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 2.99e-01 | 100.0% | 25.9% |
| 5xd7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 50.0 | 3.99e-01 | 100.0% | 95.3% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 3.01e-01 | 100.0% | 40.9% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.55 | 49.0 | 3.92e-01 | 100.0% | 60.8% |
| 1v61A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 49.0 | 3.82e-01 | 100.0% | 55.3% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 45.0 | 2.88e-01 | 100.0% | 33.2% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 47.0 | 3.20e-01 | 98.4% | 93.6% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 47.0 | 3.01e-01 | 100.0% | 27.2% |
| 4icwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 47.0 | 3.75e-01 | 100.0% | 80.0% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.86e-01 | 100.0% | 31.5% |
| 3l2pA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 3.14e-01 | 76.6% | 80.8% |
| 2qz5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 47.0 | 3.53e-01 | 100.0% | 76.3% |
| 6p0cA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 2.85e-01 | 75.0% | 83.0% |
| 1w99A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.51 | 40.0 | 3.05e-01 | 92.2% | 65.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3672263 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 60.0 | 3.59e-01 | 98.4% | 26.2% |
| 4203266 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.68 | 59.0 | 3.48e-01 | 96.9% | 25.2% |
| 3780836 | 5.1.4.257 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 | 0.67 | 57.0 | 3.52e-01 | 100.0% | 32.9% |
| 4130753 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.66 | 57.0 | 3.62e-01 | 100.0% | 52.9% |
| 3272267 | 5.1.4.166 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 | 0.65 | 58.0 | 3.52e-01 | 100.0% | 24.2% |
| 4584755 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.64 | 55.0 | 3.37e-01 | 96.9% | 32.0% |
| 3508283 | 5.1.5.156 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_RSE1_1st | 0.64 | 55.0 | 3.35e-01 | 96.9% | 31.0% |
| 3257469 | 5.1.3.246 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_RSE1_1st | 0.64 | 55.0 | 3.33e-01 | 96.9% | 31.3% |
| 4011804 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.63 | 54.0 | 3.32e-01 | 96.9% | 31.7% |
| 3805832 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.63 | 54.0 | 3.44e-01 | 100.0% | 37.3% |
| 4004011 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 42.0 | 3.58e-01 | 73.4% | 40.9% |
| 4228036 | 5.1.4.17 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N | 0.62 | 55.0 | 3.11e-01 | 100.0% | 23.8% |
| 3511321 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.62 | 51.0 | 2.99e-01 | 95.3% | 17.2% |
| 3365640 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.62 | 54.0 | 3.30e-01 | 98.4% | 29.9% |
| 3436743 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.62 | 53.0 | 3.39e-01 | 96.9% | 38.4% |
| 3993494 | 5.1.5.42 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RMC1_N | 0.62 | 52.0 | 3.44e-01 | 96.9% | 45.6% |
| 3938170 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.61 | 45.0 | 3.48e-01 | 81.2% | 76.0% |
| 4948799 | 281.1.1.0 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase | 0.61 | 42.0 | 3.20e-01 | 100.0% | 30.3% |
| 3220069 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.60 | 52.0 | 3.23e-01 | 96.9% | 29.7% |
| 3309559 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.60 | 55.0 | 3.59e-01 | 100.0% | 37.8% |
| 3311258 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.60 | 41.0 | 3.10e-01 | 71.9% | 43.1% |
| 5077455 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.60 | 50.0 | 3.22e-01 | 98.4% | 33.1% |
| 3742689 | 5.1.4.661 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st | 0.60 | 53.0 | 3.38e-01 | 100.0% | 31.1% |
| 4028495 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 52.0 | 3.32e-01 | 100.0% | 42.7% |
| 4001269 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.59 | 51.0 | 3.31e-01 | 96.9% | 40.0% |
| 2219 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 52.0 | 3.26e-01 | 98.4% | 33.0% |
| 3932344 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.58 | 50.0 | 3.20e-01 | 100.0% | 42.1% |
| 4016434 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.58 | 48.0 | 2.95e-01 | 89.1% | 18.7% |
| 3698253 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.58 | 52.0 | 3.08e-01 | 98.4% | 24.8% |
| 3207612 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.58 | 49.0 | 3.45e-01 | 100.0% | 31.1% |
| 4392365 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.58 | 49.0 | 3.15e-01 | 98.4% | 29.3% |
| 3209908 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 49.0 | 3.08e-01 | 100.0% | 30.5% |
| 3617734 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 51.0 | 3.27e-01 | 100.0% | 31.6% |
| 3273166 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 3.08e-01 | 100.0% | 45.5% |
| 3628460 | 3308.1.1.0 ↗ | beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme | 0.56 | 46.0 | 4.34e-01 | 100.0% | 76.2% |
| 4545587 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.55 | 47.0 | 2.89e-01 | 100.0% | 42.0% |
| 2832995 | 274.1.1.13 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH | 0.55 | 45.0 | 3.61e-01 | 90.6% | 72.0% |
| 3401815 | 220.1.1.18 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PTB | 0.53 | 46.0 | 3.63e-01 | 96.9% | 46.7% |
| 3257215 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 44.0 | 2.77e-01 | 98.4% | 47.1% |
| 3787332 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 48.0 | 3.81e-01 | 100.0% | 62.8% |
| 3702410 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.51 | 43.0 | 2.87e-01 | 96.9% | 52.7% |
| 3740587 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.50 | 38.0 | 3.23e-01 | 82.8% | 72.5% |